Gene Information

Name : fhuC (CVCAS_0312)
Accession : YP_005867711.1
Strain : Lactococcus lactis CV56
Genome accession: NC_017486
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter ATP-binding protein FhuC
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 314513 - 315292 bp
Length : 780 bp
Strand : +
Note : -

DNA sequence : 
ATGTATTTTGGTGCGAAAAATATCAATGTGTCTTATGGAAAAGAGCAGGTATTGAAAAACGTAACGCTGTCGATTGAAAA
AGGAAAAACGACAGCTATTATTGGAGTCAATGGTTCTGGGAAATCAACGATTTTAAAGGCACTTGGACGTTTAATTAAAT
CGGATGGACAGGTTATCTTTGATAATCAACCTTTAAGTCAACATTCTAATCGTGAAATTGCTAGAATTTTAGCGCTCTTG
CCTCAATCAATTACTGCCCCAGCTGATATTACAGTCTATGAACTTGTCAGTTTAGGACGTTTCCCACATCAAAAATTAAT
GCAACAACGTCTCTCAAAAGAAGATATTTTGTTCATAGAAGAATTGATGAGAGAAACAAAGATTTGGGACATTCGAGAAA
GTAAGATATCAGAACTTTCTGGTGGACAAAAACAAAGAGTTTTTATCACGATGATTTTAGCTCAAGATAGTGAGATTATT
TTATTAGATGAACCAACGACTTATCTAGATTTAGCTCATCAGTTAGATATTTTATGTTTATTAAAAGATTTGGCGACAAA
GAGAAATAAAACCATTGTTTACGTCATTCACGATTTAAATCATGCCGCTCGTTTTGCTGACAATCTAGTCCTTGTTAAAG
ACGGAGAAGTGGTTGAAGAAGGAACTGTTGATGAGTTATTTACTCAAAAAACGTTGAAAGAATGCTTTGGATTAGATGTC
ACTTTAGGATGTGATACCTTTACCAAAAAATTAATGATTACTGGGGTGAAAGATGCCTAA

Protein sequence : 
MYFGAKNINVSYGKEQVLKNVTLSIEKGKTTAIIGVNGSGKSTILKALGRLIKSDGQVIFDNQPLSQHSNREIARILALL
PQSITAPADITVYELVSLGRFPHQKLMQQRLSKEDILFIEELMRETKIWDIRESKISELSGGQKQRVFITMILAQDSEII
LLDEPTTYLDLAHQLDILCLLKDLATKRNKTIVYVIHDLNHAARFADNLVLVKDGEVVEEGTVDELFTQKTLKECFGLDV
TLGCDTFTKKLMITGVKDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-43 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-36 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-36 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-36 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-36 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-41 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-36 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-36 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-36 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-40 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-40 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-40 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-40 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC YP_005867711.1 ferrichrome ABC transporter ATP-binding protein FhuC BAC0164 Protein 3e-41 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC YP_005867711.1 ferrichrome ABC transporter ATP-binding protein FhuC VFG0925 Protein 3e-38 45
fhuC YP_005867711.1 ferrichrome ABC transporter ATP-binding protein FhuC VFG1042 Protein 3e-41 43