Gene Information

Name : yujD (CVCAS_2007)
Accession : YP_005869362.1
Strain : Lactococcus lactis CV56
Genome accession: NC_017486
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2058366 - 2058992 bp
Length : 627 bp
Strand : -
Note : -

DNA sequence : 
ATGTTTGAATTAACTAATATTATAAAAGAATTTTTACATAGAAAGGTTTTTGATAACTTTAAATTAACCTTTGAAGCTGG
GAAAGTTTATGCCATTATTGGTCAATCAGGTTCTGGTAAAACAACCTTACTGAATATGATTGCTAAACTTGAATCCTACG
AAGGAAGTATTCTTTATGAGGGAAAAGAATTATCAAAAATCAAGAAACATTCCTATTTTCTAAATGATTTGTCTTATCTT
TTTCAAAATTTTGGATTGATTGAAAATGAAACGATTGATAAAAATTTGGATTTGGGATTGATTAATCAAAAGTTATCCAA
GAAAACTAAACAAGAAAAAAAGCTTGAAACTCTGGCACAAGTTAATGTAGCCTATTTAAAACTCAATCAAAAAATTTATG
AATTGTCAGGTGGTGAGGCACAGCGTGTAGCACTTGCTAAAGCGATTTTGAAAGATTCACCGGTTATTTTGGCGGATGAA
CCAACAGCAGCACTAGATTCTGAGAATAGTGAAGAAGTGATGAAACTGCTTTTGAGTATGAAAAATGAAAATCGGATTAT
TATTATCGCTACGCATAATCCTGTTATTTGGGAAATGGCAGATGAGGTTGTTGAATTGTCCAGATGA

Protein sequence : 
MFELTNIIKEFLHRKVFDNFKLTFEAGKVYAIIGQSGSGKTTLLNMIAKLESYEGSILYEGKELSKIKKHSYFLNDLSYL
FQNFGLIENETIDKNLDLGLINQKLSKKTKQEKKLETLAQVNVAYLKLNQKIYELSGGEAQRVALAKAILKDSPVILADE
PTAALDSENSEEVMKLLLSMKNENRIIIIATHNPVIWEMADEVVELSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yujD YP_005869362.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 4e-30 44
yujD YP_005869362.1 ABC transporter ATP-binding protein CP003583.1.gene613.p Protein 5e-23 43