Gene Information

Name : yudA (CVCAS_1936)
Accession : YP_005869293.1
Strain : Lactococcus lactis CV56
Genome accession: NC_017486
Putative virulence/resistance : Resistance
Product : transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1993475 - 1994095 bp
Length : 621 bp
Strand : -
Note : -

DNA sequence :
ATGGTTAATATGTTTTCAGTTATAATAAATTCAACGGTTATCTACTGGGCAACAGCCCTAGATTTACTTATATTACTAGC
AATATTATATGTTCGTTTTGATAAAAAAAGTCATTTATCTATTACTTTGGGACAAATAATTGGTTCTTTTGCACTTGTAT
TGGTCAGTTTATTTTTTGCGGTCATCCTAAAACTTGTTCCAGAAGAGTGGATTTTAGGCTTACTGGGCCTGATTCCTTTA
GGACTAGGAATAAAATATTTATTCTTTGGGGATGATGATGACGATGAAGAATTAGATGAATTGCTACAAAAAAGGAAAAA
TAAAAGCTTGCTTGGAACTGTTATTATCATTTCTTTTGCGAGTTGTGGAGCGGATAATATTGCTTTGTTTACTCCATTTT
TTATGACACTGTCAGCTAATAATTTGCTATTATCTATAATAATTTTTGCCTTAAACATATTAATTTTAGGGCTTCTTGGA
AAAACAATTGCAAAAATTCCTCACCTTCATGACGTTTTAGAAAAATACAGTCGTTGGATTCTTGCTTTTGTTTATATAGT
ACTTGGAATAATGGTTTTACTAGAAAGTGGAACAGTCTCCAAAATTCTCAGTTTTTTGTAA

Protein sequence :
MVNMFSVIINSTVIYWATALDLLILLAILYVRFDKKSHLSITLGQIIGSFALVLVSLFFAVILKLVPEEWILGLLGLIPL
GLGIKYLFFGDDDDDEELDELLQKRKNKSLLGTVIIISFASCGADNIALFTPFFMTLSANNLLLSIIIFALNILILGLLG
KTIAKIPHLHDVLEKYSRWILAFVYIVLGIMVLLESGTVSKILSFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadD YP_252014.1 cadmium binding protein CadD Not tested SCCmec Protein 1e-15 44
SERP2221 YP_189776.1 cadmium resistance family protein Not tested vSe1 Protein 6e-17 44
cadD YP_254238.1 cadmium binding protein CadD Not tested ¥ðSh1 Protein 2e-15 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yudA YP_005869293.1 transporter BAC0057 Protein 6e-17 45