Gene Information

Name : ssbB1 (CVCAS_1870)
Accession : YP_005869229.1
Strain : Lactococcus lactis CV56
Genome accession: NC_017486
Putative virulence/resistance : Unknown
Product : single-strand DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1929115 - 1929540 bp
Length : 426 bp
Strand : -
Note : -

DNA sequence :
ATGATTAACAATGTCACTCTAGTAGGAAGAATCACTAAAGAACCTGAACTTAGATATACACCACAAAATAAAGCAGTTGC
TTCATTTACTCTTGCAGTTAATCGTCAATTTAAAAATGCTAATGGAGAAAGAGAAGCTGACTTCATCAATTGTGTTATCT
GGGGTAAATCAGCCGAAAACTTAGCCAATTGGACTCATAAAGGTCAATTAATTGGAGTTATTGGGAATATCCAAACTCGG
AACTATGAGAACCAACAAGGGCAACGTGTTTATATTACGGAGGTTGTCGCAAGTAATTTCCAAGTACTAGAAAAAAGTAA
TCAAGCAAATGGTGAACGAGTTGGTAATCCAGCTTCAAAACCACAAAATAATGATTCTTTTGGAAGTGATCCAATGGAAA
TTTCAGATGATGACCTACCATTTTAA

Protein sequence :
MINNVTLVGRITKEPELRYTPQNKAVASFTLAVNRQFKNANGEREADFINCVIWGKSAENLANWTHKGQLIGVIGNIQTR
NYENQQGQRVYITEVVASNFQVLEKSNQANGERVGNPASKPQNNDSFGSDPMEISDDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-38 66
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 5e-26 63
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 2e-38 58
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 3e-38 58
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 3e-27 54
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 9e-27 51
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-25 49
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 4e-28 49
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-28 49
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-28 49
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-28 49
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-28 49
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 9e-29 49
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-25 48
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 3e-24 45
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 5e-24 45