Gene Information

Name : dexB (CVCAS_1398)
Accession : YP_005868767.1
Strain : Lactococcus lactis CV56
Genome accession: NC_017486
Putative virulence/resistance : Unknown
Product : glucan 1,6-alpha-glucosidase
Function : -
COG functional category : -
COG ID : -
EC number : 3.2.1.70
Position : 1455712 - 1457259 bp
Length : 1548 bp
Strand : -
Note : -

DNA sequence :
ATGAATAATTGGTGGAAAAAAGCAGTCATTTATCAAATTTATCCCCGGTCATTTAAGGATTCAAATGATGACGGAATTGG
TGACATCAATGGAATAATAGAGAAATTAACTTATCTTGAAAAACTAGGAGTGGATGGTATTTGGCTATCTCCGATTTATC
AATCCCCGATGGTTGATAATGGTTATGACATTAGTGATTACTATAAAATTGACCCACTTTTTGGAACAATGGCTGATTTT
GAAGCGCTCATAGAAAAAGCAAAGCAACTTAATATTCGTGTCATTATGGACTTGGTTGTCAATCATACTTCTGACCAACA
TTTGTGGTTTAAAGAATCCAAAAAATCTAAAAATAATCCGAGAAGAGATTTTTATATTTGGCGGGATCAACCGATTGGAG
AATTTAAAAATTGGACTTATGACTCAAGCACTCAACAATATTATTTTCATCTTTTTAGTCCACAGCAGCCTGACTTGAAT
TGGGAAAATGAAGAAGTGCGTAAGGAAATTCATAAGATGATGAATTTTTGGTTGGCTAAGGGAATTTCTGGTTTTAGATT
AGATGTCATTGATTTGATTGGAAAAAAACCAGAACAAGAAATCACGGTTAATGGTCCAAAACTGCATGATTACCTAAAAG
AGATGAATTTAGCAACTTTTGGTAAAAAGGACTATCTCACTGTTGGTGAAGCTTGGTCAAGTTCACCAGAATTAGCAAAG
TTATATAGTGGCCCCAATCGTCATGAACTTTCAATGGTTTTTGGCTTCTGGCATCTATTGACATCAGCAGGAAACGGGGA
CAAATGGAAAAAACTCCCCTTAAATGTTCCAAAGCTAAAAGAAGCAATGACCGCTTGGCAGAAATTGACGCCAAATGAAG
CATGGAATTCTCTTTTTCTAGGCAATCATGATTTGCCACGCATTGTCTCTTTTTGGGGAGATGAGGGAACATACAGAGAA
AAATCAGCCAAAGCTTTTGCAATTCTCTTTCATTTGATGCGTGGCACTTCTTTTATTTATCAAGGCGAAGAATTAGGAAT
GACCAATTTTCCTTTTGAAAATCTGTCAGCAATAAATGACGTAGAATCACATGAATATTTTACTGACAGAAAAAAAGAAG
GACAGTCAGAAGAAGAAATTATCAAAGTTTTGCGAGAAATGAGTCGTGATAATGCTAGGACGCCAATGCAATGGACCAGT
GATGAGAAAGCTGGTTTTACAAAAGGGAAAGCTTGGCTTTCTATCAATCCTAATACTAAGATAATAAATGCTGACCAAGC
TGTCAGTGATTCTAACTCTGTATTTTATACTTATCAAAAGTTAATCAAACTTCGTCACCAAGAAAATTGGCTGATAGAAG
GAGATTTTGAATTACTTGAAAGTGCTGACGAAATCTTCGCATACTTGAGAAAAACGACAACAAGAACTTTTCTGGTGGTC
GCCAACTTATCAAATTCAAGTCAACGTTTTGAAAGTTCTTTTGTCAAAAAAAATGAAATCATCAGTAATGACAGCTTTCC
AGATTTACTGACAGACATAGAAATTTAA

Protein sequence :
MNNWWKKAVIYQIYPRSFKDSNDDGIGDINGIIEKLTYLEKLGVDGIWLSPIYQSPMVDNGYDISDYYKIDPLFGTMADF
EALIEKAKQLNIRVIMDLVVNHTSDQHLWFKESKKSKNNPRRDFYIWRDQPIGEFKNWTYDSSTQQYYFHLFSPQQPDLN
WENEEVRKEIHKMMNFWLAKGISGFRLDVIDLIGKKPEQEITVNGPKLHDYLKEMNLATFGKKDYLTVGEAWSSSPELAK
LYSGPNRHELSMVFGFWHLLTSAGNGDKWKKLPLNVPKLKEAMTAWQKLTPNEAWNSLFLGNHDLPRIVSFWGDEGTYRE
KSAKAFAILFHLMRGTSFIYQGEELGMTNFPFENLSAINDVESHEYFTDRKKEGQSEEEIIKVLREMSRDNARTPMQWTS
DEKAGFTKGKAWLSINPNTKIINADQAVSDSNSVFYTYQKLIKLRHQENWLIEGDFELLESADEIFAYLRKTTTRTFLVV
ANLSNSSQRFESSFVKKNEIISNDSFPDLLTDIEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 6e-100 46