Gene Information

Name : lbrB (CVCAS_1109)
Accession : YP_005868489.1
Strain : Lactococcus lactis CV56
Genome accession: NC_017486
Putative virulence/resistance : Virulence
Product : co-activator of prophage gene expression LbrB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1137431 - 1137958 bp
Length : 528 bp
Strand : +
Note : -

DNA sequence : 
ATGGGAGAGCTTTTTGTAAGTCCAGCTTATCAAGTGAGACGGGTTCCAATTGAAAAGATTAGAGCAAATTCTTATAATCC
TAATAAAACTGCGCCGACTGAATTTAAACTTTTAGAACGGTCGATATTAGAAGATGGTTATACCATGCCAATTGTCTGCT
ATTATGACAAAGAAAATGATACTTATGAGATTGTGGATGGTTTTCACCGCTATCTTGTAATGAAAAATTCTGAAACGATT
GCGCAAAGAGAAGGGAACTGTTTACCCGTTTCTGTGATTGATCGCCCATTAGAAGATAGAATAGCCAGCACTATTCGCCA
TAATCGTGCCAGAGGGACTCATTCAGTAGAATTAATGACAGAAATTGTTCAACAATTGGTTGAAGCTGGTTTAAGTGATC
GGTGGATTATGACAAATATTGGAATGGATAAAGAAGAATTATTAAGGCTCAAACAATTAAGTGGGCTTGCCTCTTTGTTT
AAAGGAGGGGAGTTTTCACGGTCTTGGGAATGGGATAAAGAAGAATAG

Protein sequence : 
MGELFVSPAYQVRRVPIEKIRANSYNPNKTAPTEFKLLERSILEDGYTMPIVCYYDKENDTYEIVDGFHRYLVMKNSETI
AQREGNCLPVSVIDRPLEDRIASTIRHNRARGTHSVELMTEIVQQLVEAGLSDRWIMTNIGMDKEELLRLKQLSGLASLF
KGGEFSRSWEWDKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 5e-50 64
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 1e-38 56
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 9e-39 56
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 4e-26 45
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 1e-24 45
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 1e-24 45
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 2e-24 45
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 2e-24 45
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 4e-26 45
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 2e-25 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lbrB YP_005868489.1 co-activator of prophage gene expression LbrB VFG1505 Protein 6e-26 45