Gene Information

Name : yabE1 (CVCAS_0011)
Accession : YP_005867413.1
Strain : Lactococcus lactis CV56
Genome accession: NC_017486
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 15274 - 15909 bp
Length : 636 bp
Strand : +
Note : -

DNA sequence : 
ATGATTGAGATTGAAGAACTGACAAAAAGTTACAAAGGGCATATTATTTTTGATAAATTAAATTTAAAAATTCCGGAAGG
AAAAATGACCGCAATTTATGGGACAAGTGGTGCGGGAAAGTCAACACTTTTGAATATTATCGGTTTAATTGAGGATTATG
ATGATGGGAAATATTATTTTAACGGTCAGTTTGCACCACCTTTTAATAGTTCCTTAGCTTTAAAGATGAGGAGAAATAAA
ATTTCCTATCTTTTTCAAAACTTTGCTTTATTGGAAGATGAAACAATCGAAAAAAAATTAGAGATAGCACTGATTTATTA
TAGAATTTCCAAAAAAGAAAAACGAAAAAAGATGAAGAATTTGTTACTCCAAGTAGGCATAAATCATCGATTAAATACAA
AAGTTTATAGTCTTTCTGGTGGAGAGAAACAAAGAGTAGCAATTGCACGGGCTTTATTAAAAGAAAGTCAGCTGATTTTG
GCAGATGAACCAACAGGTTCGCTTGATACAGAAAATAGAAATGAAGTGATTGCTCTTTTGCGTCAAGAAGTTGATAAGGG
AAAGACGGTTGTCATTGTGACATATGATTCTTATCTGAAAGAAATTAGTGATTTGGTTATTGAGATTGGGGAATGA

Protein sequence : 
MIEIEELTKSYKGHIIFDKLNLKIPEGKMTAIYGTSGAGKSTLLNIIGLIEDYDDGKYYFNGQFAPPFNSSLALKMRRNK
ISYLFQNFALLEDETIEKKLEIALIYYRISKKEKRKKMKNLLLQVGINHRLNTKVYSLSGGEKQRVAIARALLKESQLIL
ADEPTGSLDTENRNEVIALLRQEVDKGKTVVIVTYDSYLKEISDLVIEIGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-36 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yabE1 YP_005867413.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-38 52
yabE1 YP_005867413.1 ABC transporter ATP-binding protein CP003583.1.gene613.p Protein 1e-33 46
yabE1 YP_005867413.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-27 41