Gene Information

Name : LRHM_0606 (LRHM_0606)
Accession : YP_005865098.1
Strain : Lactobacillus rhamnosus GG
Genome accession: NC_017482
Putative virulence/resistance : Virulence
Product : putative two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 637846 - 638646 bp
Length : 801 bp
Strand : +
Note : -

DNA sequence : 
ATGCCTAGTTGCTGCAAGCATGGTTTTAAACTGAAACATGAAGCAGGAGGCATACGGTTCAAAATTAACGTCATACAGGA
GGAGGAGTTCAAAATATCCAATGCAAAGATATTACTAGTTGAAGACAATCGAGAATTTAGTGAATTGCTGAAACTGTATT
TACAAGGCGAAGGATACATTTTAACTAGAGTGTTTGATGGCAAAATTGCTATGGATACGATTAAGAATAACACTTTTGAT
GTTGTCTTGTTAGATATAATGCTTCCTGAAAAAAATGGTTTTAATGTGTTGAAGGAATTGCGCCAGACCAAGATGACACC
GGTGATTATCATAACTGCCAGAGATATGGACCAGGATGAGGTTTTGGGATTGAGCCTGGGAGCCGATGACTATCTGAAAA
AGCCATTTTCACTGGTGGCATTAAACGCCCGTATAAAGGCTCAAATACGACGAACGACTCAATACGCGGTATACGGTTAT
GAAAAAATGCATACCCAGTCACAAGTTACATTTGCTGATTTACGATTAGATAATCTCAATCAAACAGTATATAAAAATGA
TCGGCGGCTCAATTTAACTGTCAAGGAATATAGACTTCTAAAGCTTTTAATGATTCACCCTGGTCATGTTTTTTCAAAGC
AAGCAATTTATGAGAAAGTGTGGGGGGAATCCTATATTGGCGATGAAAACACAGTTAATGTCTGCATTAAGAGATTACGC
GACAAAATTCAAGACGTTAACCAGCGCTACATTAGAACAGTTTGGGGAATCGGCTATGTCCTAGAGGCGGGGGTAGAATA
A

Protein sequence : 
MPSCCKHGFKLKHEAGGIRFKINVIQEEEFKISNAKILLVEDNREFSELLKLYLQGEGYILTRVFDGKIAMDTIKNNTFD
VVLLDIMLPEKNGFNVLKELRQTKMTPVIIITARDMDQDEVLGLSLGADDYLKKPFSLVALNARIKAQIRRTTQYAVYGY
EKMHTQSQVTFADLRLDNLNQTVYKNDRRLNLTVKEYRLLKLLMIHPGHVFSKQAIYEKVWGESYIGDENTVNVCIKRLR
DKIQDVNQRYIRTVWGIGYVLEAGVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-33 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRHM_0606 YP_005865098.1 putative two-component response regulator VFG1563 Protein 3e-33 42
LRHM_0606 YP_005865098.1 putative two-component response regulator VFG1702 Protein 1e-33 42