Gene Information

Name : LRHM_0438 (LRHM_0438)
Accession : YP_005864930.1
Strain : Lactobacillus rhamnosus GG
Genome accession: NC_017482
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 458108 - 458956 bp
Length : 849 bp
Strand : -
Note : -

DNA sequence :
GTGACTTCGTTAAGGTCGCAATACGATCTCAATGAGCTGCTTAAGTCCCTCCACTTACCTCGAGCGACTTATTACGATCG
GCTTAGGCGTGATAAGAAGCCTGATAAGTATGCCGAGGTCAAAGCCTTCATCAAGAAGTGTTTTTTCGGTTCGAAAGAGA
CTTATGGGTATCGTCGAATTCACGATGAAGCAGACAAAGTCGGCTTCCACTATGCCGAGGAAACAATTAGACGCCTAATG
AGTGATATGGGATTGAAATGTGTGATTTACTCTAAACATACTTCCAAATATCACTCCTACAAAGGTCACGTTGGTCTCAT
TGCACCTAACATCTTGAATCAGAAGTTTGAAACCACACAGCCACTCACAGTGTTCCATACCGATGTGACCCAGGTACGGC
TGTACAACGGCGAGTGGGGCTATATCTCGTCAATCACAGATGAAGCCAGCCGTGAAGTGATCGCGGCTATTGTCAGTGCT
TCTCCCAATAAGGCTTTGATTCAAGCGTCACTTGATGAATTAGAGCATCACCTTAAAGAAGGCATCAAACCAACTCTTCA
CTCTGATCAAGGGTGGCAATATCAAATGGTGGACTACCAGCAATGTCTCAAGGCTATGAACATTATACAGAGCATGTCTC
GTAAAGGTAACTGTCACGATAATGCGCCCATCGAAAGCTTCTTCAACCTCCTAAAACGTGAGTGCTTGAATCGGTATCAG
ATCAACACGCTCTCAGATCTGCGCAAGCTGGTGAACGGTTACGTGGATTGGTTTAACAATGTCAGAATTTCGAGAAACAA
AAATGGCTTGACCCCAGTTGAGTACCGGGAACAAGCCATGATTGCTTAA

Protein sequence :
MTSLRSQYDLNELLKSLHLPRATYYDRLRRDKKPDKYAEVKAFIKKCFFGSKETYGYRRIHDEADKVGFHYAEETIRRLM
SDMGLKCVIYSKHTSKYHSYKGHVGLIAPNILNQKFETTQPLTVFHTDVTQVRLYNGEWGYISSITDEASREVIAAIVSA
SPNKALIQASLDELEHHLKEGIKPTLHSDQGWQYQMVDYQQCLKAMNIIQSMSRKGNCHDNAPIESFFNLLKRECLNRYQ
INTLSDLRKLVNGYVDWFNNVRISRNKNGLTPVEYREQAMIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 3e-44 43
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 4e-47 41