Gene Information

Name : LRHM_2479 (LRHM_2479)
Accession : YP_005866971.1
Strain : Lactobacillus rhamnosus GG
Genome accession: NC_017482
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2640312 - 2640524 bp
Length : 213 bp
Strand : +
Note : -

DNA sequence :
TTGGAAAATCGGATCGAAGCATTGCGCAATCAACATCACTTAACGCAACAAGACTTAGCCGATCGCTTAGAAGTGTCGCG
CCAAACCGTTAGTTCTCTCGAAAACGGCAGATATAACCCCTCACTCGGACTCGCATTTAAGCTTTCACATGTATTTAACC
TACCCATCGAACGCATTTTTATCGATGAAAGTGCGGATTCGAAGTTGCTATAA

Protein sequence :
MENRIEALRNQHHLTQQDLADRLEVSRQTVSSLENGRYNPSLGLAFKLSHVFNLPIERIFIDESADSKLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-07 46
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-07 46
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 5e-11 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRHM_2479 YP_005866971.1 transcriptional regulator VFG2175 Protein 8e-08 46
LRHM_2479 YP_005866971.1 transcriptional regulator VFG2168 Protein 8e-08 46