Gene Information

Name : LRHM_2361 (LRHM_2361)
Accession : YP_005866853.1
Strain : Lactobacillus rhamnosus GG
Genome accession: NC_017482
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATP-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2519622 - 2520332 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence :

ATGACCACACTGGTTCAACTCAAGCAAGTCAGCAAAGTTTACGGCAGTGGCCATACGGCGGTAGTCGCCTTGCATCCCAC
CGACTTTACGCTGCATGCCGGTGAATTTGCCGCCGTCATCGGGCCATCCGGTTCAGGCAAAACGACCTTGTTAACGATTA
TCGGCAATCTCCAGCAACCCAGTGACGGTCAGATTGTGATTAACGGTCAGGACACCACGCACTTTAATGAACACCAGCGG
ACTGATCTGCGGTTTAATACGTTTGGCTTTATCTTACAAGCCAGCAACCTAATTCCTTTTTTGACCGTTAAAGATCAGCT
AGCCTTAGTCGACCGTTTCAATCATCATCGCCAACACAAACGCTCCATGACCGAGCTCTTTGACCTACTCGGCATTAGCG
ACCTGACCGCCAATTATCCGTCCGCTTTATCCGGTGGCGAAAAACAGCGGGTTGCAATTGCCCGTGCGTTATACAACGAC
CCGAAGATTATCTTAGCCGACGAACCGACCGCCAGCCTCGACACCAAACGCGCACTGCAAGTCGTGGCACTTCTGGCTGA
TATTGCCCACAAAACCAAACGCGGCGTCATCATGATCACCCACGACACGCGTTTGCTGGATGACGTGGATACGCTATATG
AAATGCGCGATGGTCAGCTCAAGCAACTCAGAGACAGAGCGGCCAAAAAAGTCACACCGAATCCGGCGTAG

Protein sequence :

MTTLVQLKQVSKVYGSGHTAVVALHPTDFTLHAGEFAAVIGPSGSGKTTLLTIIGNLQQPSDGQIVINGQDTTHFNEHQR
TDLRFNTFGFILQASNLIPFLTVKDQLALVDRFNHHRQHKRSMTELFDLLGISDLTANYPSALSGGEKQRVAIARALYND
PKIILADEPTASLDTKRALQVVALLADIAHKTKRGVIMITHDTRLLDDVDTLYEMRDGQLKQLRDRAAKKVTPNPA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
SARLGA251_00480	YP_005754062.1	ABC-type transport system ATPase	Not tested	Type-XI SCCmec	Protein	1e-37	43
unnamed	AAP55232.1	unknown	Not tested	SaPIbov2	Protein	3e-41	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
LRHM_2361	YP_005866853.1	antimicrobial peptide ABC transporter ATP-binding component	CP001581.1.gene798.p	Protein	7e-37	41