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Name : LRHM_1973 (LRHM_1973) Accession : YP_005866465.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_017482 Putative virulence/resistance : Virulence Product : exopolysaccharide biosynthesis protein Function : - COG functional category : - COG ID : - EC number : - Position : 2100233 - 2100991 bp Length : 759 bp Strand : - Note : - DNA sequence : ATGATGCAGTTATCATTTTCTAAACTTTTTCATCGTCATCAGGAGGATCAAGAAACCCAAAAGAATGGCGTTATGCTAGT CGCTTTTGCTGAGCCCAAACATGTAGTGTCTGAACAGTTTCGAACGGTGCGCACTAATATTGAATTTGCTGGGGCTGCTT TAGATCGTTGCCAAGTAGTCATGTTTACGTCTTCGGCCATGTCTGAAGGTAAATCAACGGTCTCGGCTAATGTCGCGGTT ACTTGGGCCCAAGCTGGGAAAAAAGTTTTGCTGATTGATGCGGATCTCAGGAGACCGACTATTCACGCCACGTTTAGGAC ATTGAATATAGACGGGGTAACAACAATTCTAATTGGAAAAGATGAAGCTGGAGCTGTTGTAGAAGAAACATTTGTTGATA ATTTGAGTGTCATTACGTCAGGACCTATTCCGCCAAATCCCTCTGAATTGTTAAATTCTAAAAGAATGGCAAATTTACTG AATTGGGCCAGGGAAAACTATGACATTATCGTTCTTGATACCCCACCTGTTTTAGCCGTATCTGATGTACAAGTCTTGGT TCCAAAAACTGACGGTGTAGTTGTTGTGGCTAATATGGGCAAGACTCTAAAAGGTGATCTTCGACGAACGGTTGAAGTTT TAAAGCTTGCTAATGCTAAAATTCTTGGCTCAGTTGAACGAGTTAAAGCTAAACACGGCGATCGAGGGTATGGCTACGGC TACGGTTATGGGTATGGTACGAATACTGGAAAGAAGTAA Protein sequence : MMQLSFSKLFHRHQEDQETQKNGVMLVAFAEPKHVVSEQFRTVRTNIEFAGAALDRCQVVMFTSSAMSEGKSTVSANVAV TWAQAGKKVLLIDADLRRPTIHATFRTLNIDGVTTILIGKDEAGAVVEETFVDNLSVITSGPIPPNPSELLNSKRMANLL NWARENYDIIVLDTPPVLAVSDVQVLVPKTDGVVVVANMGKTLKGDLRRTVEVLKLANAKILGSVERVKAKHGDRGYGYG YGYGYGTNTGKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0061 | YP_300151.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 5e-33 | 45 |
| cap1B | AAA64641.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-31 | 42 |
