|
Name : LRHM_0194 (LRHM_0194) Accession : YP_005864686.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_017482 Putative virulence/resistance : Virulence Product : putative sugar permease Function : - COG functional category : - COG ID : - EC number : - Position : 206188 - 207525 bp Length : 1338 bp Strand : + Note : - DNA sequence : ATGAAATTTCTGGTTGATATGCTCAGCCAGCCTTCCATCATCGCCGGAATTGTTGTCTTAGTGGGCTTGATAGCATTACG TAAACCGTTTACCGAAGTCATTGGCGGAACCGTTCGAGCATTTATCGGTTTTGTCGTCATGCTTGCAGGTACCAATATTA TTGTCGGTGCGCTGAATAACTTTGCTAAGCTATTTACCAAGGCCTTCAACATGCATGGCATGATTCCCAGTAACGAAGCG GCAATCGGAGTGACAGTTGCTAAATACGGAACGGTTGCAACTTTTATCTTTGTCTTTGGACTTGTATTGAACATTGTGTT GGCGCGTATTACGAAGTTTAAGTATATTTTCTTATCAAGTGACCATGCGTTTTACATGGCATGTTGTTTAACGCCGATTA TGATCTTAGGCGGCTTAAATACGGTTGAAGCTATCGTCTTTGGTTCCATGACTTTAGGTGTCATTCTCTGCGTCTTCCCA GCCATCGCCCATCCAACGATGAAAATTATTACTGGACGTGACGACATGAGCTTTGCCCATTTCGGCACATTGGAATACTG GCTATCGGCAAAGATCGGATCACTTGTCAATAAGAATAAGAAATCGAAATCGATTGAAGATATTAATTTCCCGAAGTCAT TAGCATTTTTACAAGATAGCAATGTTTCCGTTACGATTGTGATGACCATCTTGTTCTTCGTGGTGACGGCAGTGGCTGGG CCGGCGTATGTTGGTAAGCTAACCGACTTGAATCCATACGTTTGGGCGCTCTTGCAAGCTGCTGAGTTTACCGCGGGGAT TATCGTCTTAGTCCAAGGCGTTAATATGTTATTAGCTGAGATCACACCCGCTTTCAAGGGGTTCAGCGAAAAGATTGTTC CAAGCGCCGTACCCGGTTACCCATTTGCCATTCTGTTTAAGGGCACATCCAACGCATTACTGGCCGGTTTCTTGGTAAGC TTACTCGGCGGTTTACTTTCTATGGGGGTTCAGATCATAATCGGGACAACCATTGTTATTCCGGGGATTGTGATGCACTT CTTCTGCGGTGGTATCGCGGCAATCTTTGGCAATGCTACGGGTGGTCGCAAAGGTGCGCTGATTGGACCGTTTATCGGTG GGATTATTCTAAGCTTTTTGCCTTTGGTCGCCACCGGTCTTTATGGAGGCTTGGGTTACACTGCAACTTATTGGTCTGAT AGTGATTTCAATACAATCGGGGTCTTACTTGGACTTGTTGCTAAAGTTGGTAAGTGGCCGATCATGCTGGCTGCATTGAT TATCTTTGCCTTCCCATTTGTCTTTAGTGCTTTACACAAGAAAAAACTGGTTGATTAA Protein sequence : MKFLVDMLSQPSIIAGIVVLVGLIALRKPFTEVIGGTVRAFIGFVVMLAGTNIIVGALNNFAKLFTKAFNMHGMIPSNEA AIGVTVAKYGTVATFIFVFGLVLNIVLARITKFKYIFLSSDHAFYMACCLTPIMILGGLNTVEAIVFGSMTLGVILCVFP AIAHPTMKIITGRDDMSFAHFGTLEYWLSAKIGSLVNKNKKSKSIEDINFPKSLAFLQDSNVSVTIVMTILFFVVTAVAG PAYVGKLTDLNPYVWALLQAAEFTAGIIVLVQGVNMLLAEITPAFKGFSEKIVPSAVPGYPFAILFKGTSNALLAGFLVS LLGGLLSMGVQIIIGTTIVIPGIVMHFFCGGIAAIFGNATGGRKGALIGPFIGGIILSFLPLVATGLYGGLGYTATYWSD SDFNTIGVLLGLVAKVGKWPIMLAALIIFAFPFVFSALHKKKLVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 7e-59 | 42 |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 6e-59 | 42 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 6e-59 | 42 |
