Gene Information

Name : LRHM_1697 (LRHM_1697)
Accession : YP_005866189.1
Strain : Lactobacillus rhamnosus GG
Genome accession: NC_017482
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1781307 - 1783952 bp
Length : 2646 bp
Strand : -
Note : -

DNA sequence :
ATGACGAGTCAAACTAAATTATTGTTGATTGACGGCAACTCAATCGCATTCCGTGCCTTTTTTGCCCTGTACAATCAACT
CGATCGTTTCACCAATCAAGATGGGCTGCACACCAATGCCATCTACGCATTTAACAATATGCTCGAGATTGTTTTAAAGT
CGGTTAAACCAGATGCTGCCTTGGTTGCGTTTGATGCTGGCAAGACGACTTTTAGAACAGCTAAATACGCGGATTATAAA
AGCGGTCGGGCGAAGACGCCAAGCGAGTTGTTAGAGCAGCTGCCGTATATCAAGGAATTACTCGACGATATGGGCATTCA
GCATTATGAACTCAAGGATTATGAAGCTGATGACATTATCGGAACGATGGCTAAGCGAGCTGATGATGCAGGGTGGCAGA
CAACAATCGTGACTGGTGATCGTGATTTAACGCAATTAACGACGGATCAAACAACGGTGCAGGTCACGGTCAAAGGCGTT
AATGAACTTGAGGCGTACACGCCGGAACACGTTAAAGAAAAGCTTGGCATTACCCCCACTCAGATTATTGATCTAAAGGG
GTTAATGGGTGATACGTCAGATAATTATCCAGGGGTCACCAAGGTTGGCGAAAAAACGGCTTTAAAACTGCTAAAGCAAT
ATGGCAGTATCGAAAACCTTTACGCCAACATTGATGCGATGAAGACTTCCAAAATGAAGGAAAGTCTCATCAATGACAAA
GACAAAGCGTACCTGAGCAAGCAGTTAGCCACAATTGACCGCGATGCACCTGTGACCATCGATCTTGCAGACGTAAAGTA
TAACGGTCCCGATTTGGCGAAGTTACGCGATTTCTATACTAAGATGAATATGAATTCCCTGTTGAAGAAAATTGGCGGGG
ATGTTGCAAAACCGTCACAGCCTGTACACTATTCCGTTTTGGATGACCAATCAATTTTGGCGCTCACGAAAACAACCGAA
CCGTTAACCTTTGAGATTGAAATGTTAGCGGATAATTATCATACCGCTGAACAAGTGGGCTTTTTCATTGGGACTAAAGA
AGAAACTTACGTCAGCACGGATGTGTCATTGTTGACGATTCCGGAAGTTGCTAAGTGGCTTGGTGATTCAAACCGCGACT
TAACGGTGTTTGATGGCAAGCGCAATATTGTGGCTGCTCATCGTCTTGGCCTGAAGTTGCCGGACATTGCCTTCGATGTT
TTGTTGGCCTCGTATCTGATTAATCCAGATGAAAATAGCAATGATCTGGGTAAAATTGCAGAAGACCATGATTATCATGA
CTTGCCTCGCGATGAAGATGTATATGGTAAAGGTGCTAAGCGTCAAGTGCCTGAAGATAAACTGCTGTTTGAACAATTCG
CTCGTAAGTCTCAGGCCTTATTCGCCTTGCGTCCTGATTTAACCGAAGACTTGGCTAAACAGGAACAGACGGATCTTTTC
ACGGACATGGAAATGCCACTGGCGCGGGTTTTGGCAGAAATGGAAATTCAAGGTATTACGTTAAATGCTCAAACCTTAAA
GGACATGGGAACCGAATTTTCGCAAAGCATTAAGGTGTTGGAAGAAAAAATTTATGGTGAAGCCGGCGTTAAATTTAATC
TGAATTCTCCAAAGCAATTAGGCGAAGTGTTATTCGAAAAACTTAATTTACCAGTGATTAAAAAGACCAAAACCGGTTAT
TCCACCAGTGTCGATGTTTTAAACGAATTGAAATCGGCTAGTCCAATTGTTCAGGATATTCTGGATTATCGCGGCTGGGC
CAAACTAAACTCGACTTATGTGGTGGGTTTGTTGAAAGCACAAATGCCGGATCATAAAATTCACACCCGTTATTTACAGA
CACTGACGCAAACCGGGCGCCTGAGTTCCGTTGATCCGAATATGCAAAATATTCCAGCACGGGATGAAGGTAAGATTATC
CGGAAAGCCTTTGTCCCTTCTCATCCAGATTGGCAGATTTTTAGCTCGGATTATTCGCAAATCGAATTACGCGTGTTATC
GCATATTTCGGGTGATGAGAATATGCAGCAAGCCTTTAAACACGGCGTTGACATTCACGCAAATACCGCCATGAAAATTT
TTGGCCTCGATTCACCTGATGAGGTCACGCCGGATATGCGCCGGCAAGCCAAGGCCACGAACTTTGGGATTGTATACGGC
ATCAGTGACTATGGCCTAGCACAAAATATCGGGATTTCGCGGAAACAGGCCAAGGCGTTTATCGACGGTTATTTTGAACA
ATACCCGAAAGTCCACGATTACATGGAAAATATGGTCAAGAAAGCGCGTGAAGACGGCTATGTTGAAACGCTCTTCCACC
GCCGTCGTTATCTGCCCCAGATTCACTCCCGCAATTTCAACTTGCGCAAGTTTGCGGAACGAACGGCGATGAATACGCCG
ATCCAAGGGAGTGCCGCAGATATCATTAAAGTCGCGATGATTCGCATGCAAAAGGCGTTGGATGAGGCCCATCTGCAGGC
GAAAATGTTGCTGCAGGTACACGATGAATTGATTTTTGAAGCTCCGACTGCTGAAATGGCGCAACTTGGCCAATTAGTGC
CTAAGATTATGGACTCGGCTGTTTCACTGGCGGTACCTTTGAAAGTCGAAAGTCATTATGGACCGACCTGGTTTGATGCG
AAATAA

Protein sequence :
MTSQTKLLLIDGNSIAFRAFFALYNQLDRFTNQDGLHTNAIYAFNNMLEIVLKSVKPDAALVAFDAGKTTFRTAKYADYK
SGRAKTPSELLEQLPYIKELLDDMGIQHYELKDYEADDIIGTMAKRADDAGWQTTIVTGDRDLTQLTTDQTTVQVTVKGV
NELEAYTPEHVKEKLGITPTQIIDLKGLMGDTSDNYPGVTKVGEKTALKLLKQYGSIENLYANIDAMKTSKMKESLINDK
DKAYLSKQLATIDRDAPVTIDLADVKYNGPDLAKLRDFYTKMNMNSLLKKIGGDVAKPSQPVHYSVLDDQSILALTKTTE
PLTFEIEMLADNYHTAEQVGFFIGTKEETYVSTDVSLLTIPEVAKWLGDSNRDLTVFDGKRNIVAAHRLGLKLPDIAFDV
LLASYLINPDENSNDLGKIAEDHDYHDLPRDEDVYGKGAKRQVPEDKLLFEQFARKSQALFALRPDLTEDLAKQEQTDLF
TDMEMPLARVLAEMEIQGITLNAQTLKDMGTEFSQSIKVLEEKIYGEAGVKFNLNSPKQLGEVLFEKLNLPVIKKTKTGY
STSVDVLNELKSASPIVQDILDYRGWAKLNSTYVVGLLKAQMPDHKIHTRYLQTLTQTGRLSSVDPNMQNIPARDEGKII
RKAFVPSHPDWQIFSSDYSQIELRVLSHISGDENMQQAFKHGVDIHANTAMKIFGLDSPDEVTPDMRRQAKATNFGIVYG
ISDYGLAQNIGISRKQAKAFIDGYFEQYPKVHDYMENMVKKAREDGYVETLFHRRRYLPQIHSRNFNLRKFAERTAMNTP
IQGSAADIIKVAMIRMQKALDEAHLQAKMLLQVHDELIFEAPTAEMAQLGQLVPKIMDSAVSLAVPLKVESHYGPTWFDA
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 55