|
Name : LRHM_1269 (LRHM_1269) Accession : YP_005865761.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_017482 Putative virulence/resistance : Unknown Product : pyruvate dehydrogenase complex E3 component Function : - COG functional category : - COG ID : - EC number : - Position : 1316893 - 1318296 bp Length : 1404 bp Strand : + Note : - DNA sequence : ATGGTTGTAGGCGATTTTGCAATCGATTTGGACACCGTTGTGATTGGCTCTGGCTCAGGTGGTTACGTAGCTGCGATCCG AGCAGCCGAAATGGGTCAGAAGGTAACTGTTATCGAGAATACCTTCATTGGCGGGGTTTGTTTGAATGTTGGCTGTATCC CATCAAAAGCTTTGATCAATGCCGGTCACCGTTATCAAGATGCCTTGGAAGCAAGCACGTTTGGTATTAATGCCAAGGGC GCGGATCTTGATTTCAAAAAAACCCAGGATTGGAAGCAAAACAAGGTTGTGCACACGTTAACCAGCGGTGTTGCGATGCT TTTAAAAAAGCACAAAATCGAAACCATCATGGGGACGGCTTTCTTGAAAGATGATCATAGTCTGCGGGTTATGCAAAAAG ACTCGGCTCAGACATACACCTTCAAGAATTTGATCATTGCAACCGGAAGCCGGCCAATTGAAATCAAAGGCTTCAAATTT GGCAAACGGATTTTGGATTCAACCGGTGGCCTAAACTTACCGGAAGTACCAAAAGAATTCGTGGTGATTGGCGGTGGCTA CATCGGATCCGAACTGGCGAGCGCCTATGCCAACTTAGGCGCACATGTCACAATTCTTGAAGGCACCAGCTCAATTTTGC CAAACTTTGAAAAGGATATGGTTCAACTCGTCTTGAACTCCTTTAAAAAGCGCGGCGTTACAGTGATTACCAACGCGATG GCGAAGGAAGCCGAAGATACCGGCAATGGCGTCAAGGTAACCTATACAGCGGACGGTAAAGAACAAACCATTGCCGCAGA TTATGTGATGGTCACAGTCGGGCGGCGGCCAAATACCGATGATTTGGGCTTAGACATTGTTGGCATTGAAACAACGGATC GCGGCTTGATCAAAGTCGATGCGCAAGGACGAACCAATAAGCCTAATATTTTTGCAATCGGTGACATTGTTCCCGGTGCT GCATTAGCGCATAAAGCAAGTTACGAAGGTAAGATAGCGGCTGAGGCGATCAGTGGCAAGGCAAGCGCGGTTGACTATAA AGCAATGCCGGCTGTTTGTTTCACGGATCCAGAACTGGCTACAACTGGCATGACGCTTGCTGAGGCCAAGGATAAAGGCA TTAAAGCTAAAGCAAGCAAGTTTCCATTTGCGGCGAATGGCCGTGCTTTAAGTTTGGCGCAAACCGAGGGCTTCGTTCGT CTGGTTACGGATGAAAACGGAACCGTCATCGGTGGTCAAGTTGCTGGTGCCGGTGCCAGTGATTTGATCTCAGAATTAAC GGTCGCGGTTGAAGGTGGACTTAACGCTGAAGATTTGGCTTTGACCATCCATCCACATCCGACCTTAAGTGAAACCATTA TGGATGATGCTGAAGTTGCATTAGGGTTGCCAATTAATATCTAG Protein sequence : MVVGDFAIDLDTVVIGSGSGGYVAAIRAAEMGQKVTVIENTFIGGVCLNVGCIPSKALINAGHRYQDALEASTFGINAKG ADLDFKKTQDWKQNKVVHTLTSGVAMLLKKHKIETIMGTAFLKDDHSLRVMQKDSAQTYTFKNLIIATGSRPIEIKGFKF GKRILDSTGGLNLPEVPKEFVVIGGGYIGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAM AKEAEDTGNGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGIETTDRGLIKVDAQGRTNKPNIFAIGDIVPGA ALAHKASYEGKIAAEAISGKASAVDYKAMPAVCFTDPELATTGMTLAEAKDKGIKAKASKFPFAANGRALSLAQTEGFVR LVTDENGTVIGGQVAGAGASDLISELTVAVEGGLNAEDLALTIHPHPTLSETIMDDAEVALGLPINI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 2e-103 | 48 |
