Gene Information

Name : HN6_00961 (HN6_00961)
Accession : YP_005864023.1
Strain : Lactobacillus salivarius CECT 5713
Genome accession: NC_017481
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1195612 - 1196331 bp
Length : 720 bp
Strand : -
Note : -

DNA sequence : 
ATGAAACTACTAATGATCGAAGATAACAAATCAGTATGTGAAATGATGTCCATGTTTTTTGAAAAAGAAAAATGGGATGT
AGAATATGCTTATGATGGTATTTCTGCAGTAGAAAAATTTAAAGAAAAATCTGATGAGTGGGATATGATCACACTTGACT
TGAATTTGCCTGGAATGGATGGAATGCAAGTTAATGCTGAAATAAGAAAAATTTCAAGTACTGTTCCAATCATAATTTTG
ACTGCTAGAGATTCTGAAAGTGATCAGATTTTAGGCTTAGAAATGGGAGCAGATGAGTATGTTTCCAAGCCATTTTCACC
AATAACATTAATTGCAAGAATTAAAGCTCTTCATCGCCGTGCTCAAATTTCTGCATTAGGAAGCAACAAACAGAACAAGG
TAGATGATGATTTCGATGTTAAAACAGATCATTTTAAACTAAATTCTAGTACTAGAGAAGCTTACTTGAATGACAATAGG
ATTGATGGTCTAACACCAAAAGAATTTGACTTGTTAAGAGTATTAGCAAAAAAACCACGTCAAGTATTTTCTAGAGAACA
ATTATTGCAATTGGTATGGGATTATGAATACTATGGTGATGAAAGAACAGTTGATGCACATATTAAAAAGTTAAGACAAA
AAATTGAAAAAGTTGGTCCACAAGTTATACAAACTGTGTGGGGTGTTGGATATAAGTTTGATGATACAGAGGCAGAATAA

Protein sequence : 
MKLLMIEDNKSVCEMMSMFFEKEKWDVEYAYDGISAVEKFKEKSDEWDMITLDLNLPGMDGMQVNAEIRKISSTVPIIIL
TARDSESDQILGLEMGADEYVSKPFSPITLIARIKALHRRAQISALGSNKQNKVDDDFDVKTDHFKLNSSTREAYLNDNR
IDGLTPKEFDLLRVLAKKPRQVFSREQLLQLVWDYEYYGDERTVDAHIKKLRQKIEKVGPQVIQTVWGVGYKFDDTEAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-36 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HN6_00961 YP_005864023.1 two-component response regulator HE999704.1.gene2815. Protein 1e-38 42
HN6_00961 YP_005864023.1 two-component response regulator NC_012469.1.7685629. Protein 5e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HN6_00961 YP_005864023.1 two-component response regulator VFG1563 Protein 8e-37 42
HN6_00961 YP_005864023.1 two-component response regulator VFG1702 Protein 1e-36 41