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Name : clpC (HN6_00187) Accession : YP_005863305.1 Strain : Lactobacillus salivarius CECT 5713 Genome accession: NC_017481 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence Function : - COG functional category : - COG ID : - EC number : - Position : 232785 - 235283 bp Length : 2499 bp Strand : + Note : - DNA sequence : ATGGTTATGGCTATGGAAGAAAGGTATACACCAAGTGCTAAACAAGTATTAGTTCTTGCACAACAACAAGCTAATTACTT CAAGCATCAAGCAATAGGAACAGAGCATTTGCTTTTAGCACTAACAATGGAGAAAAATGGCGTAGCTGCTAAAGTATTAC AAAGTTTTGTAGTAACTGAAGTAGATGTGCGAGAAGAAATTGAACATATCGTAGGATACGGTAATTTACAACGTAGAGGC GCTGATACTTATTTACCATATTCCCCAAGGACTCGTTATGTATTAGAGCGTGCTAGAGAACATGCTAAACTTTTTAATGT TGAAAAGGTAGGAACAGAACATATTTTGTTAGCATTATTAGAAGATGATAAAACTATTTCTTCACGTATTCTAGCAGCTC TGAATATTGATTTACGTAAGGTGAAAAATATTACCTATCGTACAATGGGTGTAGATGCAACAACAGCTAATAGAACACGT AAGAAATTAGCGTTATCAGAAAAGAAACAGGATAATGGTACACCTACGTTAGATGAATTAGCACGTGATTTGACAGAAAT GGTGCGTAAAGATCAAATTGATCCAGTAGTTGGTAGAGATAATGAAATTAAGCGTGTTGTTCAAATTTTAAGTAGAAGGA CAAAGAATAATCCAGTTCTTTTGGGAGAACCAGGTGTAGGTAAAACAGCTGTTGCAGAAGGATTTTCACAAAAGATTGTA AATGGTGAAGTTCCTGATAATTTGAAGAATAAGCGTGTAATGATGCTTGATATGGGATCTTTGGTTGCTGGAACAAAATA TCGTGGTGAATTTGAAGATCGATTAAAGAAGATTATTGAAGAAATTCGTGAAGATGGCAATGTTATTTTATTCATTGATG AAATGCATACTCTAATAGGCGCGGGTGGTGCTGAAGGCGCAATAGATGCTTCCAATATTTTAAAACCAGCATTAGCGCGT GGTGAAGTACAAGTAATAGGTGCAACAACTTTAAATGAATATCAAAAATATGTTGAAGCTGATGCAGCTTTGGAAAGACG CTTTGCTAGTGTGACAATTAATGAACCAACTCCAGAAGTAGCGTTGACAATTCTAAAAGGATTACGTCCTAAATATGAAA AACATCATCAACTTCAAATTACAGATGAGGCATTAGAGAGTGCAGTTAAGTTAAGTAAAAGATATATTGCTTCAAGATTT TTACCTGACAAGGCAATTGATTTAATGGATGAGGCTGCTGCTAGAGTAAGAATTAATAATTCACAAAAAGTGGACAAAGT TTCTGCAATAAAGAAGAAATTATCAGAGCTTTCCCAAGAGAAGACAGAAGCGTTGTTAAAAGAAGATTTTGAAAAAGCTG CAGAAATCAGAAATGAAGAATTAAAGATTCAAGAAAAGCTTGAAAAGCAAATCCAACGTGACAAAGATGAAGAGGATAGC AATAACTATCGTGTAAAAGTTACGGCTGAAGATATTGCAGAAGTTGTTTCTGAATGGACTGGTGTTCCAGTAACTCAAAT TAATCGTTCTGAAGGAGACCGACTAATTAGATTAGAAAAGATATTGCATAATCGAGTTATAGGACAAGATGAAGCTGTTA AAGCAGTAAGTAAAGCGATAAGAAGAGCAAGAAGTGGTTTGAAGGATCCTACAAGACCAATTGGCTCATTTATGTTCTTA GGTCCTACAGGTGTAGGTAAAACTGAATTAGCTAAAGCTTTAGCAGAAGCTATGTTTGGCTCAGAGGATTCAATGATTAG AATTGATATGAGTGAATATATGGAGAAATACACAACTAGTCGTTTAATTGGATCTCCTCCTGGATACGTAGGATATGATG AAGGCGGACAATTAACTGAAAAGGTTAGAAATAATCCTTATTCAGTAGTATTATTAGATGAAGTTGAAAAAGCTCATAAT GATGTTTTCAATATCTTGTTACAAGTATTGGATGATGGATTTTTAACTGATTCTAAAGGTAGAAAGGTAGACTTCAGAAA TACAATTATCATTATGACATCTAACTTAGGTGCTACAGCCTTACGCGATGAAAAATCAGTAGGTTTTGGTGCAAAAGATG TCAGCGATGATTATGAAGCAATGGCAGCAAAAGTTAGAGAAACATTGAAGAAGACTTTTAGACCAGAATTCTTGAATCGT CTTGACGAAACTGTTGTATTCCATTCGCTTAATAAAGAAGAAATTCATCAAATTGTTAAATTGATGGCTAAGAATATTAT AGATAGGATTAAAGAACAAAATATTAATCTGAAAATTACCCCTGCAGCAATAGATATAGTTGCAGAAGCTGGATTTGATG CTGAATATGGTGCTCGTCCTATTAGACGTGTCCTTCAAGATAAGATAGAGGACTTACTAAGTGAAGAATTATTAGCAGGT AATATCGAAACTGGAGCAACAGTAACAATAGGTGCTAAAAAAGGTGAAATAACGATAAAAGTTAAGAATCCAGTAGCTGC AGAAAAAATAAATAGTTAA Protein sequence : MVMAMEERYTPSAKQVLVLAQQQANYFKHQAIGTEHLLLALTMEKNGVAAKVLQSFVVTEVDVREEIEHIVGYGNLQRRG ADTYLPYSPRTRYVLERAREHAKLFNVEKVGTEHILLALLEDDKTISSRILAALNIDLRKVKNITYRTMGVDATTANRTR KKLALSEKKQDNGTPTLDELARDLTEMVRKDQIDPVVGRDNEIKRVVQILSRRTKNNPVLLGEPGVGKTAVAEGFSQKIV NGEVPDNLKNKRVMMLDMGSLVAGTKYRGEFEDRLKKIIEEIREDGNVILFIDEMHTLIGAGGAEGAIDASNILKPALAR GEVQVIGATTLNEYQKYVEADAALERRFASVTINEPTPEVALTILKGLRPKYEKHHQLQITDEALESAVKLSKRYIASRF LPDKAIDLMDEAAARVRINNSQKVDKVSAIKKKLSELSQEKTEALLKEDFEKAAEIRNEELKIQEKLEKQIQRDKDEEDS NNYRVKVTAEDIAEVVSEWTGVPVTQINRSEGDRLIRLEKILHNRVIGQDEAVKAVSKAIRRARSGLKDPTRPIGSFMFL GPTGVGKTELAKALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGYVGYDEGGQLTEKVRNNPYSVVLLDEVEKAHN DVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNLGATALRDEKSVGFGAKDVSDDYEAMAAKVRETLKKTFRPEFLNR LDETVVFHSLNKEEIHQIVKLMAKNIIDRIKEQNINLKITPAAIDIVAEAGFDAEYGARPIRRVLQDKIEDLLSEELLAG NIETGATVTIGAKKGEITIKVKNPVAAEKINS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005863305.1 | negative regulator of genetic competence | VFG0079 | Protein | 0.0 | 57 |
| clpC | YP_005863305.1 | negative regulator of genetic competence | VFG0080 | Protein | 5e-158 | 49 |
