|
Name : serS (HN6_00163) Accession : YP_005863298.1 Strain : Lactobacillus salivarius CECT 5713 Genome accession: NC_017481 Putative virulence/resistance : Unknown Product : Seryl-tRNA synthetase (Seryl-tRNA(Ser/Sec) synthetase) (Serine--tRNA ligase) (SerRS) Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 216476 - 217753 bp Length : 1278 bp Strand : + Note : - DNA sequence : ATGCTAGATATTAAAGATATTCGATTAAATACAGAAGAATATAAACGTCGCTTGGGAACAAGAGGCGTAAAACCAGAAGA AATTGATGAATTAGTAGCTGAAGACAAGAAACGTAGAGAGTTACTTGTTGAAACTGAAAATTTAAAGAAAGAACGTAATG AAGTTTCTGAAGCTATTGCTCAAGCAAAACGAAATAAAGAAGATGCTAGTGAACAAATTCAAGCAATGCGCAAAGTTGGT ACTAAGATCAAAGAACTTGATGAAAAACTAGCTAAAGTAGAAGAAAATGTAAAATCTATGGCTGCTCACTTGCCTAACTT ACCAAATCCTACTATTCCAGTAGGACCAGATGAAGATTCAAATGTTGAGCTTTATAAAGTAGGTACACCACGTAAATTTG ATTTTGAACCTAAAGCACACTGGGATATTGGTGAAGACCTAGGAATTTTAGATTTCGATCGCGCAGCTAAAGTTTCTGGG GCAAGATTTGTTTTCTACAAAGGATTAGGAGCAAAGCTTGAACGTGCGGTTTATAACTTTATGTTAGATGAACATGCTAA AGAAGGTTATACAGAAGTAATTCCTCCATATATTGTTAAAGCTAAATCAATGTATGGAACTGGCCAATTCCCTAAATTTA AGGATCAAGTATACCAAGTTAATGGGGAAGATATGACTTTAATTCCAACAGCTGAAGTACCTCTAACTAATTATTATCGT GAAGAAGTAATCCCAACAGAAGACTTACCAGTTTACTTTACAGCTTTATCACCATCCTTCCGCTCTGAAGCAGGAAGTGC AGGTCGAGATACTCGTGGCTTGATACGTATGCACCAATTTAATAAAGTTGAAATGGTTAAATATACTAAGCCAGAAGATT CATATAATGAATTGGAAAAAATGACAAAAAATGCTGGTAACATTATGGAAAAACTAGGATTACCATACCATGTAATTACT CTATCTACTGGAGATATGGGATTCAGTGCAGCTATGACACATGACTTAGAAGTATGGATGCCAGCACAAGATACTTATAG AGAAATCTCAAGCTGTTCTAATTGTGAAGATTTCCAAGCTAGAAGAGCAAGAATTCAATATCGTGATGAAAATGGTAAAC TACAATATGTTCATACATTAAACGGCTCTGGTTTAGCTGTAGGTAGAACTGTAGCTGCTATTTTAGAAAACTACCAAAAT GAAGATGGATCAGTAACAATTCCAGAAGCATTACGTCCATATATGCAAGGTTTAGAAGTTATCAAGAAAGAAAAATAA Protein sequence : MLDIKDIRLNTEEYKRRLGTRGVKPEEIDELVAEDKKRRELLVETENLKKERNEVSEAIAQAKRNKEDASEQIQAMRKVG TKIKELDEKLAKVEENVKSMAAHLPNLPNPTIPVGPDEDSNVELYKVGTPRKFDFEPKAHWDIGEDLGILDFDRAAKVSG ARFVFYKGLGAKLERAVYNFMLDEHAKEGYTEVIPPYIVKAKSMYGTGQFPKFKDQVYQVNGEDMTLIPTAEVPLTNYYR EEVIPTEDLPVYFTALSPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKPEDSYNELEKMTKNAGNIMEKLGLPYHVIT LSTGDMGFSAAMTHDLEVWMPAQDTYREISSCSNCEDFQARRARIQYRDENGKLQYVHTLNGSGLAVGRTVAAILENYQN EDGSVTIPEALRPYMQGLEVIKKEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-146 | 68 |
