|
Name : lysS (HN6_01136) Accession : YP_005864176.1 Strain : Lactobacillus salivarius CECT 5713 Genome accession: NC_017481 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1413005 - 1414492 bp Length : 1488 bp Strand : - Note : - DNA sequence : ATGGCTAATCAACAATCAATGAATGATCAGTTAAGAGTTCGTCGTCAAAAGATGCAAGAATTGCGTGATGAAGGCGTTGA TCCATTCGGTCATAGATTTGAGCGTGATTTCTTAAACAAAGAATTACACGACAAATTTGAAGATAAGACAAAAGAAGAAT TAATTGACTTAGATGTTAAGGCTACAATCGCAGGACGTATGGTAGCAAAGCGTGGTAAAGGTAAGGTAGGCTTTGCTGAT TTACAAGATAAGACAGGTAGAATGCAACTTTACATTCGTAAAGATGAAGTTGGCGAAGAAATGTACCATATCTTTAAACG TTCAGATTTAGGAGATTTCTTAGGTGTAACTGGTGATGTTATCAAGACTGATATGGGTGAGCTTACAATTAAAGTAACTA AACTTACTTTCTTATCCAAAGCTCTAAGACCATTGCCAGATAAATTCCACGGTCTTCAAAACGTAGAACAAATTTATCGT CAACGTTACTTAGACTTAATTACTAACCGTGAAAGTTACAATCGTTTTGTAAACCGTAGCAAGATTGTTACAGCTGTTCG TAATTATTTAGATAGTAATGGATTTTTAGAAGTTGAAACACCTGTATTACATAATCAAGCTGGTGGTGCAGCTGCACGTC CATTTATTACACATCATAATGCATTGGATATTCAACTTTACTTACGAATTGCTTTGGAATTACACCTCAAACGTTTGATT GTTGGCGGAATGGAACGTGTTTATGAAATTGGTAGAGTTTTCCGTAATGAAGGAATTGATACTAAGCACAATCCAGAATT TACAATGCTTGAAACTTATGCAGCATACTTTGACTTTAAAGACGTTATGGATGAAACAGAAGGTATCTTTAAAGCAGCTG CTAAAGTTGTAACATCTGATGGAAAGATTAACTATCAAGGAACGGACGTTGATTTTAATAAAGAATTCAAACGTGTTCAC ATGGTAGATCTAATCAAGGAAAAGACAGGAGTAGATTTCTGGAAAGAAATGTCTCTTGAAGAAGCTAGAAAGATAGCAGA TGAGCATAAAGTTCATTATGAACCATACTGGCAAGTAGGTCATATTATTAATGAATTCTTTGAACAATTCTGTGAAGATA CAATTGTTGATCCAACTTTCGTTTATGGTCATCCTGTAGAAATTTCACCATTAGCTAAGAAAAATGCTGATGATCCACGT TTCACAGATCGTTTTGAATTATTCATTTTAGGAAATGAATATGCAAATGCCTTTACTGAATTGAATGATCCAATTGACCA ACGCCAACGCTTTGAAGCACAAGTTGCTGAACGTCAAGCTGGTAATGATGAAGCTGAAGGTATCGATGAAGATTATATTG AAGCTATGGAATACGGAATGCCTCCAACAGGGGGATTAGGTATAGGAATTGATAGATTGGTAATGCTTCTAACAGATGCA CCATCAATTCGTGATGTACTCCTATTCCCAACTTTGAGACCAGAATAA Protein sequence : MANQQSMNDQLRVRRQKMQELRDEGVDPFGHRFERDFLNKELHDKFEDKTKEELIDLDVKATIAGRMVAKRGKGKVGFAD LQDKTGRMQLYIRKDEVGEEMYHIFKRSDLGDFLGVTGDVIKTDMGELTIKVTKLTFLSKALRPLPDKFHGLQNVEQIYR QRYLDLITNRESYNRFVNRSKIVTAVRNYLDSNGFLEVETPVLHNQAGGAAARPFITHHNALDIQLYLRIALELHLKRLI VGGMERVYEIGRVFRNEGIDTKHNPEFTMLETYAAYFDFKDVMDETEGIFKAAAKVVTSDGKINYQGTDVDFNKEFKRVH MVDLIKEKTGVDFWKEMSLEEARKIADEHKVHYEPYWQVGHIINEFFEQFCEDTIVDPTFVYGHPVEISPLAKKNADDPR FTDRFELFILGNEYANAFTELNDPIDQRQRFEAQVAERQAGNDEAEGIDEDYIEAMEYGMPPTGGLGIGIDRLVMLLTDA PSIRDVLLFPTLRPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-111 | 46 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 5e-85 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005864176.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-111 | 46 |
