Gene Information

Name : HN6_01486 (HN6_01486)
Accession : YP_005863113.1
Strain :
Genome accession: NC_017479
Putative virulence/resistance : Unknown
Product : Transposase ISLasa17c, IS256 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 21304 - 22173 bp
Length : 870 bp
Strand : -
Note : -

DNA sequence :
ATGGTCATCAAGATGTACTCCAAGGGCGTCACAACTCGTGAAATCGCTGATATGGTCGAGAGAATGTACGGCCACTACTA
CTCACCAACCACGGTTTCAAACATCACTAAGCGGACGGAACACCTGGTTGAAGAGTTCCATGAGCGCAAATTCAAGTACT
CACAGTACGTCTGTGTGTTCCTCGATGCTACTTACATTCCGTTACGCCGTGGTACCGTTGAACGAGAAGCCGTTAACGTA
GCGATCGGAATTCGAAGTGACGGTGGTAAGGTAGTTCTTGACTACAGTATCGCACCGACCGAGAACGGAGCCGCTTGGTC
TGAACTACTCCAGGGATTACGCGCACGGGGGATTAAAGATATTCAGTTGTTCATCGTCGACGGTTTAGTTGGACTTCAAT
CTGCGATTGAGGCTAACTACCCGCAGGCGAAGTTTCAACGGTGCTGGGTCCACGCAGAGCGCAACCTTTTAGGATACGTT
CGCAAAAACGATCGCAGGGAGATTATCACCGACTTTAAGGCCATTCGGCAAGCAGAGAACCTACAAGCCGCCAAAGAACG
ATTGGCGGCTTTCAGTGCTAAGTGGGAGTCTAGTTATAAGCGTCGAATTAAGAATCTAGTCCAAATGGCGGAGCTATTCA
CGTTCTTCAGTTTTCCAACTGCGATCCGTCAGACCATCTACTCGACGAACCTAATTGAGTCGTTTAATAAGAGCCTGAAG
AAGATGGCCCGACGTAAAGAGCAGTTTCCAAACGAAGGGGCCCTCGATCGCTTTATCATGACGCAAGTAATGGAGTACAA
CGATAAATTTGAGAATCGAGCACATCGGGGATTCAAGGACTGTCACGACACGCTTGATTCGATGTTTTAG

Protein sequence :
MVIKMYSKGVTTREIADMVERMYGHYYSPTTVSNITKRTEHLVEEFHERKFKYSQYVCVFLDATYIPLRRGTVEREAVNV
AIGIRSDGGKVVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIVDGLVGLQSAIEANYPQAKFQRCWVHAERNLLGYV
RKNDRREIITDFKAIRQAENLQAAKERLAAFSAKWESSYKRRIKNLVQMAELFTFFSFPTAIRQTIYSTNLIESFNKSLK
KMARRKEQFPNEGALDRFIMTQVMEYNDKFENRAHRGFKDCHDTLDSMF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0035 AAM75241.1 EF0035 Not tested Not named Protein 6e-56 52
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 1e-71 50
unnamed AAM21176.1 transposase Not tested Not named Protein 2e-71 50
unnamed AAM21184.1 transposase Not tested Not named Protein 2e-71 50
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 2e-71 50