Gene Information

Name : LJP_0828 (LJP_0828)
Accession : YP_005862104.1
Strain : Lactobacillus johnsonii DPC 6026
Genome accession: NC_017477
Putative virulence/resistance : Virulence
Product : conjugated bile salt hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 889856 - 890836 bp
Length : 981 bp
Strand : +
Note : -

DNA sequence :
ATGTGTACCTCAATTGTTTATAGTTCAAATAATCATCATTATTTTGGCCGAAATCTAGACTTGGAAATTTCTTTTGGTGA
ACATCCTGTAATTACACCAAGGAATTATGAGTTTCAATATCGTAAATTACCAAGTAAAAAGGCAAAATATGCCATGGTTG
GGATGGCGATTGTAGAAAATAATTATCCACTATATTTTGATGCAGCAAATGAAGAAGGGCTAGGAATTGCTGGTCTTAAT
TTTGATGGTCCGTGTCATTATTTTCCAGAAAATGCGGAGAAAAATAATGTTACACCATTTGAATTAATTCCTTATTTGCT
AAGTCAATGTACTACGGTTGCTGAAGTAAAAGATGCATTGAAAGATGTTAGCTTAGTAAATATAAACTTTTCGGAAAAAC
TACCACTTTCTCCACTTCACTGGTTAATGGCTGATAAGACTGGTGAGTCGATCGTTGTAGAATCGACTTTAAGTGGATTA
CACGTTTATGATAATCCAGTTCATGTTTTAACCAATAATCCTGAATTTCCAGGCCAGTTACGTAACTTAGCTAATTATAG
TAATATAGCACCTGCACAGCCTAAAAATACTCTTGTTCCAGGTGTTGACCTTAATTTATATAGTCGCGGGTTAGGGACTC
ATTTTTTGCCAGGAGGAATGGATTCGGCCAGTCGTTTTGTGAAAGTAGCTTTTGTTCGGGCACATTCCCCTCAAGGAAAT
AATGAATTAAGTAGTGTAACAAATTATTTCCATATTTTACATTCAGTTGAACAGCCAAAGGGAACAGATGAAGTCGGACC
AAATTCTTATGAGTACACAATTTACTCTGATGGAACTAACTTGGAGACAGGCACGTTTTATTATACCAATTATGAAAATA
ATCAAATTAACGCCATTGAATTAAATAAAGAAAACTTAAATGGTGATGAGTTAATAGATTACAAGTTGATTGAAAAGCAA
ACAATTAATTATCAAAATTAG

Protein sequence :
MCTSIVYSSNNHHYFGRNLDLEISFGEHPVITPRNYEFQYRKLPSKKAKYAMVGMAIVENNYPLYFDAANEEGLGIAGLN
FDGPCHYFPENAEKNNVTPFELIPYLLSQCTTVAEVKDALKDVSLVNINFSEKLPLSPLHWLMADKTGESIVVESTLSGL
HVYDNPVHVLTNNPEFPGQLRNLANYSNIAPAQPKNTLVPGVDLNLYSRGLGTHFLPGGMDSASRFVKVAFVRAHSPQGN
NELSSVTNYFHILHSVEQPKGTDEVGPNSYEYTIYSDGTNLETGTFYYTNYENNQINAIELNKENLNGDELIDYKLIEKQ
TINYQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 3e-80 54
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 4e-80 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LJP_0828 YP_005862104.1 conjugated bile salt hydrolase VFG2162 Protein 1e-80 52