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Name : LJP_0724 (LJP_0724) Accession : YP_005862002.1 Strain : Lactobacillus johnsonii DPC 6026 Genome accession: NC_017477 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 790327 - 791688 bp Length : 1362 bp Strand : + Note : - DNA sequence : ATGTACCAAAATTATATCACAGGACAAACTTCTTTAACACTTAACTTGGACTTTTCCGTGCCAGAAAATCATCTAATAAA CGTAATCAGTACTTTTGTAGACTCTATACCTGATGACGTAATGCTAGAAACAACTTCTGATACTGGCAGACCTGCATATC ATCCAGCTATGATGCTTAAGATCCTACTCTTTGCTTATTCTAGAAGAGTATTTTCGGGTAGAAAAATTGAAAGAATGCTG GAAGAAAATCTACCTATGATGATTCTAGCCGAAAATAGAAAGATGTCCTACCACACTATTAATAACTTTAGATCTAGTGA CCATGCCAATGAAGTAATTAAGAAGTGTTTTGTCTACTTTACTTCATTATTAGAAGATGAAGGTTTAATTCGTGAAAGTG CTGTCTTTATCGATGGTACTAAGATTGAGGCTGATGCAAATAAGTACACCTTTGTTTGGAGTAAAGCAGTTGAAAAGTAT CATGATAAGTTAAAAAAGGACGCAGTTAGCTTATATGATGAGCTGATCAATAAGGAAGTTATTAAGGCTATGGCCGAAGA AGAGGTTCAAACTAGTCAAGGATTAGAAATTCTAGCTCAAGAAACAGAAAAAGAAATCAAGAAAATTACTAAAGAGATTG AAGAAGAGCCTAAAGTTATTCCAGGTGGATCTAAAAACAAAGTCAAAAGACGTGGATTAAAGAAGATTCTACACAAGCTT CAAAAAGATCTTATTCCTAGAGCTAAGAAATATGAAGAAGCTGAAAAGATCTTTGATGGTCGCAACAGCTACTCTAAAAC AGATCATGAGGCCACATTCATGCATATGAAAGAAGACCATATGCGAAATGGCCAATTAAAACCAGGCTACAATATTCAAG CAGCAACTACTAACCAATATGTTGTAGACTTTGCCCTATTCCCTAATCCAACTGACTTTAGAACCTTAGAACCATTTTTA GAACAGATGAAATCTCGCGGTATCTTAGATAAGTTTCATAACATTGTGGCTGATGCTGGCTATGGTAGTGAGTATAACTA TTCAATTCTAGAAGAAAATTATTCAGACAAAGATTATCAGATCCCATACACGTTATACGAAAAAGAACAAACACGGAAGT ATAAGAAAGATCCGTCAAAGATTGCCAATTGGTACTATAACGAAGAAGATGACTATTACATAGACAAGTCTGGTGTTAGA TTCAACTTTAAGTATTATAGTCAGAGAAAAGATCGAACTACGGGCATGGTTAGAGATTTTAAGATCTATGAAGCAGACGA GTTCCAGCTAACTGAAGAATTAACCAAATTAGCTAAAACAAAACATACTAATCTAGTGTTGGATGATTACTCGACGGAGT AG Protein sequence : MYQNYITGQTSLTLNLDFSVPENHLINVISTFVDSIPDDVMLETTSDTGRPAYHPAMMLKILLFAYSRRVFSGRKIERML EENLPMMILAENRKMSYHTINNFRSSDHANEVIKKCFVYFTSLLEDEGLIRESAVFIDGTKIEADANKYTFVWSKAVEKY HDKLKKDAVSLYDELINKEVIKAMAEEEVQTSQGLEILAQETEKEIKKITKEIEEEPKVIPGGSKNKVKRRGLKKILHKL QKDLIPRAKKYEEAEKIFDGRNSYSKTDHEATFMHMKEDHMRNGQLKPGYNIQAATTNQYVVDFALFPNPTDFRTLEPFL EQMKSRGILDKFHNIVADAGYGSEYNYSILEENYSDKDYQIPYTLYEKEQTRKYKKDPSKIANWYYNEEDDYYIDKSGVR FNFKYYSQRKDRTTGMVRDFKIYEADEFQLTEELTKLAKTKHTNLVLDDYSTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAC67565.1 | hypothetical protein | Not tested | Type-IVc SCCmec | Protein | 4e-60 | 42 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 8e-60 | 42 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 1e-59 | 42 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 1e-59 | 42 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 1e-59 | 42 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 4e-57 | 42 |
