|
Name : LJP_0224 (LJP_0224) Accession : YP_005861513.1 Strain : Lactobacillus johnsonii DPC 6026 Genome accession: NC_017477 Putative virulence/resistance : Unknown Product : glucan 1,6-alpha-glucosidase Function : - COG functional category : - COG ID : - EC number : - Position : 260489 - 262105 bp Length : 1617 bp Strand : + Note : - DNA sequence : ATGACACCTTGGTGGAAAAAAGCTGTTGTTTATCAAGTTTATCCTAAGTCATTTCAAGATAGTAATGGTGATGGAATTGG AGATATCCCCGGAATCATTTCACGGCTGGGGTATCTAGAAAAACTGGGAATTGATGCTATTTGGCTGTCGCCTGTTTACT TATCCCCTGGTGTAGATAATGGCTATGATATCTCTGATTATCAAAAAATAGACCCACAATACGGAACAATGGCTGACATG GATAATCTGATTAGAGAAGCTAAAAAACATCATATACGCATTATTATGGACCTTGTCGTTAACCATACATCTGACCAGCA TCCTTGGTTCATTGAAGCAAGAAAAAGTAAGGAGAATCCATACAGAGATTTCTATATTTGGCATGATCCGGTAGAGGGCC ATGAACCTAATGAGTTGAAATCTGCTTTTTCTGGTTCAGCTTGGAAGTTTGATGAAAAAACTGGTCAATATTACTTACAC TTCTTTGCAGATCAACAACCAGATCTTAATTGGAAGAACCCAAAATTAAGAAATAAAATCTATGAAATGATGAATTATTG GATCGATAAGGGAATTGGCGGCTTTAGGATGGATGTGATTGAACTTATTGGAAAAGATCCCGATAAAAAGATTCGCGAGA ATGGTCCAATGCTTCATCCATATTTAAAAGAGATGAATGAGAATACTTTTGCCGGTAAAGAATTAATGACGGTGGGTGAA ACATGGAACTCTACTCCAAAGATTGCTGCAGAATATTCAGATCCAGCTCGTCATGAATTATCGATGGTATTTCAATTTGA AAATCAAGGCTTAGATCAGCAAGAAGGAAAAGAAAAATGGGATTTACGTCCGCTTGATTTAGGCGAATTGAAAAAAGTTC TAGTTAAATGGCAGACAGAAATTGATTTTAATCATGCATGGAATAGTCTTTTTTGTGAAAATCATGATATTCCGCGAGTT ATTTCACGATGGGGAAATGACAAAGAATATCGAGTTCAAAGCGCAAAAATGTTTGCGATTGTACTGCATTTAATGCACGG AACACCTTATATCTATAATGGTGAAGAAATTGGGATGACGAATTGTCCTGTTAAGTCAATTGATGAAGTAGAGGACATTG AAAGTATCAATATGTACCGCGAAAGAATTGATAAGGGCTACAGTAAGGATGAACTAATTAAAGCAATTAATACTAAAGGT CGAGATAATGCACGCCGTCCAATGCAGTGGTCAAATGGAGAAAATGCTGACTTTACTACAGGAACACCGTGGCTAAAATT AAACCCAAACTACAAGACCATTAACGTTAAAGAAGCCTTAGAAGATCCAAATTCTATTTTTTATACCTATCAAAAATTAA TTAAACTTCGCCATGAAAATTCTGTTGTGGTGGATGGAGATTTTGAACTTGTTGAAAATACTAGTGATAATATTTTGGCC TTTTGGCGAAAACTAGAAGATGAAAACTGGCTAGTAGTCGCTAACTTGTCTGGTGAGGACCAAAATCTAAATTTAGATAT TCCCTTTAAAGAAGTTTTGATTAGTAACTATGAAAAACGAGACAGTTTAAAAGATATGGTTTTAAAACCTTATGAAGCTT TTGCAGTTAAGGCATAG Protein sequence : MTPWWKKAVVYQVYPKSFQDSNGDGIGDIPGIISRLGYLEKLGIDAIWLSPVYLSPGVDNGYDISDYQKIDPQYGTMADM DNLIREAKKHHIRIIMDLVVNHTSDQHPWFIEARKSKENPYRDFYIWHDPVEGHEPNELKSAFSGSAWKFDEKTGQYYLH FFADQQPDLNWKNPKLRNKIYEMMNYWIDKGIGGFRMDVIELIGKDPDKKIRENGPMLHPYLKEMNENTFAGKELMTVGE TWNSTPKIAAEYSDPARHELSMVFQFENQGLDQQEGKEKWDLRPLDLGELKKVLVKWQTEIDFNHAWNSLFCENHDIPRV ISRWGNDKEYRVQSAKMFAIVLHLMHGTPYIYNGEEIGMTNCPVKSIDEVEDIESINMYRERIDKGYSKDELIKAINTKG RDNARRPMQWSNGENADFTTGTPWLKLNPNYKTINVKEALEDPNSIFYTYQKLIKLRHENSVVVDGDFELVENTSDNILA FWRKLEDENWLVVANLSGEDQNLNLDIPFKEVLISNYEKRDSLKDMVLKPYEAFAVKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 9e-123 | 50 |
