Gene Information

Name : LJP_1681c (LJP_1681c)
Accession : YP_005862947.1
Strain : Lactobacillus johnsonii DPC 6026
Genome accession: NC_017477
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1834399 - 1835250 bp
Length : 852 bp
Strand : -
Note : -

DNA sequence :
ATGTCCAGTTATGGCGTTTATACCCAGCGTTATTTTGCCGATAGCGGTCAAATTCAATACGAACAACGCCGTTTAAATTG
CCATCGCAAAAGTCTACTCGAATATAGTCCGGCATTCTTTAACCAATTGACCACTGCGCTTAAGGCTAAGTTCCGAGTGC
ACAGTGTAGATAGCTTTGTCGGTGCTTATAAACGTCACCATCCAGCTGAATATTGCCCCGCAACACCCACTGTTTATCGT
TACATTGATCGCGGGTTACTAGCTGTCGCCAATATCGATTTACCACAACAGGTCAAACGTCACCAAAAGCACCGTACGGG
TCGTGTACGCCAAAATAAAAAGATCTTGGGGACTTCAATTGAACAGCGACCAGTAGCGGCTAATGATCGTTCTGAATTTG
GTCATTGGGAAGGTGATTTAGTCAAAGGCAAGCGAACCAGCGATCAACCGGCACTGCTCACCCTAACTGAACGAATGACG
CGCTACGAAGTCGTGATCAGAATCCCCAACTATCAGGCTGAAACCTGTAAGGCTGCAGTTCAACAGTTTGTGAATAAACT
TGATGCTGAGGTGGTTAAGTCACTCACTTTTGATAATGGTGCAGAATTTTCTGCGCTGAGTGAGGTCACTGGTACCAACC
TATATTTTGCTCATCCTTATACGCCGTCAGAACGGGGCAGTAACGAACAGCTTAATGGGCTACTAAGAGAATTTATCCCT
AAAGGTCAATCAATTACCAGTTTCAGTGATGATCATATTAAGCAAGCGACCGCGGCACTTAACCAACGACCACGTAAACT
ATTTGGTTATAAATCAGCCAATGAATTCATGGCTGAGCAGCTACTCGCATGA

Protein sequence :
MSSYGVYTQRYFADSGQIQYEQRRLNCHRKSLLEYSPAFFNQLTTALKAKFRVHSVDSFVGAYKRHHPAEYCPATPTVYR
YIDRGLLAVANIDLPQQVKRHQKHRTGRVRQNKKILGTSIEQRPVAANDRSEFGHWEGDLVKGKRTSDQPALLTLTERMT
RYEVVIRIPNYQAETCKAAVQQFVNKLDAEVVKSLTFDNGAEFSALSEVTGTNLYFAHPYTPSERGSNEQLNGLLREFIP
KGQSITSFSDDHIKQATAALNQRPRKLFGYKSANEFMAEQLLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_1078 YP_698400.1 IS1470, transposase Not tested Not named Protein 1e-42 42
CPR_0648 YP_697974.1 IS1470, transposase Not tested Not named Protein 1e-42 42
CPR_0314 YP_697643.1 IS1470, transposase Not tested Not named Protein 1e-42 42
CPR_0967 YP_698290.1 IS1470, transposase Not tested Not named Protein 1e-42 42
CPR_0321 YP_697650.1 IS1470, transposase Not tested Not named Protein 9e-43 42
CPR_0659 YP_697986.1 IS1470, transposase Not tested Not named Protein 8e-28 42
CPR_0628 YP_697955.1 IS1470, transposase Not tested Not named Protein 3e-42 41
CPR_0379 YP_697708.1 IS1470, transposase Not tested Not named Protein 2e-42 41
CPR_1088 YP_698410.1 IS1470, transposase Not tested Not named Protein 3e-41 41
CPR_0383 YP_697712.1 IS1470, transposase Not tested Not named Protein 3e-42 41