Gene Information

Name : LJP_1668c (LJP_1668c)
Accession : YP_005862934.1
Strain : Lactobacillus johnsonii DPC 6026
Genome accession: NC_017477
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1822992 - 1823672 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAGTAATTGAATTAAAAGATGTAAGTAAATCCTATGGTCAAGGAGAGGCCAAGGTTAATGCTCTAAAAAATATAAA
TTTTGAAGCTCAAAAAGGTGAGGTTGTCTTAATTGAAGGACCTTCTGGAGCGGGCAAGAGTACTTTTCTAACAATTGCAG
GAGCACTGCAAAAGCCTACTTCTGGTGAAGTATTTATTGGAGGAGATAACGTAACTAACTATTCTCCTAAACAAGCTGAT
GCATTACGTCTAGATAAAATTGGCTTTGTCTTACAGGCTTATAATTTAGTTCCTTATTTGACTGTTCGGGAACAGTTCAT
CTTAGTAGATAAGGTTAAAAAGACCGGCAATCTAAGTAAAGAAGCGCTTGATGGATTGCTAGATGAATTAGGAATTTCTC
AACTGGTAAATAAATATCCTAAGGAATTGTCAGGTGGGCAGCAGCAAAGAGTGGCAATTGCGAGAGCATTATATGCCGAT
CCAGCCATTATTTTAGCTGATGAACCTACTGCTTCATTAGATAGTGAAAAGGTTGAAGAAGTAGGAAAACTATTTAAGAC
TTTAGCTAAACAAAAAGAAAAGGCTATTATTCTAGTTACCCATGATTTAAGACTGAATAAGTATTCAGATAAGATTTATG
AAATGTTAGATGGACGTTTGAGCTTGAAAAAAGGTAATTAA

Protein sequence : 
MSVIELKDVSKSYGQGEAKVNALKNINFEAQKGEVVLIEGPSGAGKSTFLTIAGALQKPTSGEVFIGGDNVTNYSPKQAD
ALRLDKIGFVLQAYNLVPYLTVREQFILVDKVKKTGNLSKEALDGLLDELGISQLVNKYPKELSGGQQQRVAIARALYAD
PAIILADEPTASLDSEKVEEVGKLFKTLAKQKEKAIILVTHDLRLNKYSDKIYEMLDGRLSLKKGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 6e-50 50
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 5e-43 48
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LJP_1668c YP_005862934.1 ABC transporter ATPase CP001581.1.gene798.p Protein 7e-37 44