Gene Information

Name : LJP_1603c (LJP_1603c)
Accession : YP_005862869.1
Strain : Lactobacillus johnsonii DPC 6026
Genome accession: NC_017477
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1746101 - 1746847 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence :
ATGAGTGAAGTAGTTCAAGTTCAAAATATTACTAAGACTTATGGTAAAAAAGGTGAAAAACAATACCAAGCTTTAAAGGG
CGTCAGCTTTGATGTGGAACGTGGTGAATTTGTTGGAATCATGGGTGCATCTGGGTCTGGTAAAACCACTTTGTTAAATA
TTTTATCTACATTAGATCAACCTACAACTGGAAATGTATATATTAATGGTCGCGATATTACTGGCTTAAATAAAAATCAA
ATGGCAGATTTCCGCGGTCAAGAAATTGGGTTTATTTTTCAAGATTTTAACCTATTAGAAAATCTAACAAATCGTGAAAA
TATTGCTCTTCCTCTTTCACTTCAAAATGTAAAGAGCAGTCAGATTAATCCTAAAGTGGATAAAATTGCTAAGCGACTAG
GAATTGATCATATTTTAAATAAATATCCGGCAGAAATCTCTGGTGGACAAAAACAACGTGTTGCAGCAGCGCGTGCATTA
GTTCATGAACCAGCTATTCTTTATGGAGATGAACCAACTGGGGCACTTGATTCAAAGAGTGCTACTGAATTACTTGAAAC
AATGAAAGGTCTAAATGAAAATGATAGAGTTTCTATTTTAATGGTTACTCACGATCCATATTCTGCTTCATATGCTAGTC
GAATTCTTTTCATTAAAGATGGTAAGATCGGAAAAGAAATTAAAAAAGATAGTAAAAGTAGAGAAGAATTTTATCAAGAA
ATTATTGCAGAATTAGGTAGACGTTAA

Protein sequence :
MSEVVQVQNITKTYGKKGEKQYQALKGVSFDVERGEFVGIMGASGSGKTTLLNILSTLDQPTTGNVYINGRDITGLNKNQ
MADFRGQEIGFIFQDFNLLENLTNRENIALPLSLQNVKSSQINPKVDKIAKRLGIDHILNKYPAEISGGQKQRVAAARAL
VHEPAILYGDEPTGALDSKSATELLETMKGLNENDRVSILMVTHDPYSASYASRILFIKDGKIGKEIKKDSKSREEFYQE
IIAELGRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LJP_1603c YP_005862869.1 ABC transporter ATPase NC_012469.1.7686878. Protein 6e-44 43
LJP_1603c YP_005862869.1 ABC transporter ATPase CP001581.1.gene598.p Protein 9e-38 42
LJP_1603c YP_005862869.1 ABC transporter ATPase NC_008702.1.4606598. Protein 1e-35 42
LJP_1603c YP_005862869.1 ABC transporter ATPase CP001581.1.gene798.p Protein 2e-36 41