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Name : LJP_1443 (LJP_1443) Accession : YP_005862715.1 Strain : Lactobacillus johnsonii DPC 6026 Genome accession: NC_017477 Putative virulence/resistance : Unknown Product : Site-specific recombinase, DNA invertase Pin related protein Function : - COG functional category : - COG ID : - EC number : - Position : 1548429 - 1550006 bp Length : 1578 bp Strand : + Note : - DNA sequence : TTGGGTAAAGTGAGGATTATCCCCGCTCATCAGCAAAAAGGCAATAGCGTTCAACCGCAAAAAAATAGACTACCATTTGA ACAGCTCCGAGTGGCGGCCTACTGCCGGGTTTCGACTGATTATGATGAACAAGCTAGCTCCTACGAAACTCAGGTGGCTC ACTATAAAGAATTAATTCAAAAAGAACCAACCTGGGAGTTTGCAGGTATCTACGCCGATGATGGAATCTCAGGGACTAAC ACTAAGAAGCGGGAACAATTTAACCAGATGATTGCAGCCTGCAAAGCCGGTAAAATTGACCTGATCGTCACTAAATCAAT TAGCCGGTTTGCTCGAAATACCATTGATTGTTTGAAGTATATCCGAGACTTAAAAGCCATCAATGTGGCCATCTTCTTTG AAAAAGAGAACATCAACACCATGGATGCCAAAGGTGAGGTGCTGATTACCATCATGGCTTCTCTTGCCCAGCAAGAAAGT GAATCCCTATCGCAAAACGTTAAAATGGGAATCCAGTACCGCTACCAACAAGGTAAGGTCTTCGTCAACCATAATCATTT TCTCGGCTATACCAAGGACGATCAGGGTAATCTGGTAATTGAACCGGAAGAAGCTAAAGTCATCAAACGGATCTTCTATA GTTATCTAAACGGGATGAGTATGAAGCAAATCGCGGACTCACTCAAAGCTGATGGTATTTTAACTGGTGGTAAAACAAAG AACTGGCAATCCAGCGGTGTTTCAAAAATTCTAAAGAATGAGAAATACATGGGTGATGCTCTATTGCAAAAGACTTACAC TATTGATTTTCTGAGCAAGAAACGCGTCAAGAATAACGGTATCATGCCTCAATACTATGTAGAAAACGACCATCCCGCGA TTATTCCCAAGCCGGTATTCATGCAAGTCCAGCAGCTCATCAAACAACGACAAAACGGGATCACTACTAAGAATGGTAAG CACCGGCGACTTAACGGTAAATATTGTTTCTCCCAAATAGTCTTTTGTGGAAAATGCGGCGACATTTTTCAACGGAATAT GTGGTACCGACCAGAAAAGGTAGCAGTCTGGCGTTGTGCTAGTCGAATAAAGCGAAGCAAAACCGGAAGGCGATGCATGA TTAGAAATGTCAAAGAACCACTGCTAAAGGAAGCCACCGTAGAAGCCTTTAACCAGCTCATTGAAGGACACGAGTTAGCT GGCAAACAGATCAAGGCTAACATTATGAAGGTCATTAAAAATTCTAAAGGACCTACCCTTGATCAACTCGATAAACAACT GGAAGAGGCCCAAATGCAGCTAATCCAGGCCGCCAACCAGCATCAAAATTGCGATGTCCTCACCCAGCAAATCATGGATT TACGAAAGCAAAGAGCAAAGGTGCAAAGCCGTGAAGCTAAACAGCAAGCAAAACTACACAGCATTGATGAAATCAACAAA CTGATCGAATTCCACAAATATGGCTTAGTGGACTTTGATGAGGGTTTGGTTCGTCGCCTAGTAGAAAAAATCACCATCTT CAAACGCTACATGGAGTTCAAGTTCAAAGATGGTGAAGTTATCAGAATTAACAAATGA Protein sequence : MGKVRIIPAHQQKGNSVQPQKNRLPFEQLRVAAYCRVSTDYDEQASSYETQVAHYKELIQKEPTWEFAGIYADDGISGTN TKKREQFNQMIAACKAGKIDLIVTKSISRFARNTIDCLKYIRDLKAINVAIFFEKENINTMDAKGEVLITIMASLAQQES ESLSQNVKMGIQYRYQQGKVFVNHNHFLGYTKDDQGNLVIEPEEAKVIKRIFYSYLNGMSMKQIADSLKADGILTGGKTK NWQSSGVSKILKNEKYMGDALLQKTYTIDFLSKKRVKNNGIMPQYYVENDHPAIIPKPVFMQVQQLIKQRQNGITTKNGK HRRLNGKYCFSQIVFCGKCGDIFQRNMWYRPEKVAVWRCASRIKRSKTGRRCMIRNVKEPLLKEATVEAFNQLIEGHELA GKQIKANIMKVIKNSKGPTLDQLDKQLEEAQMQLIQAANQHQNCDVLTQQIMDLRKQRAKVQSREAKQQAKLHSIDEINK LIEFHKYGLVDFDEGLVRRLVEKITIFKRYMEFKFKDGEVIRINK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-125 | 53 |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 4e-121 | 52 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 4e-121 | 52 |
