Gene Information

Name : LJP_1438c (LJP_1438c)
Accession : YP_005862710.1
Strain : Lactobacillus johnsonii DPC 6026
Genome accession: NC_017477
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1544067 - 1544312 bp
Length : 246 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCAAGCAACCAAATAACTTAAAAATTAAATACAAGGTTAGTTATAAGAAATTGTGGAAACTGCTGATTGATAGGGG
ATTACAGAAAAAAGATTTACAAACCGAATGCGATATTAGCGCTGCTTCCGTTGCTAAGTTAGGAAAAGATGCTAATGTTA
CTACTGATCTTTTAATGAAGATATGCACTGGCTTAGACTGCAATCTTAATGATATTTGTGAAACTGTACCAATTAACGGA
GAATAG

Protein sequence : 
MSKQPNNLKIKYKVSYKKLWKLLIDRGLQKKDLQTECDISAASVAKLGKDANVTTDLLMKICTGLDCNLNDICETVPING
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01461 YP_003783861.1 hypothetical protein Not tested PiCp 5 Protein 5e-14 55
CpC231_1455 YP_005683818.1 hypothetical protein Not tested PiCp 5 Protein 4e-14 54
CpI19_1462 YP_005685904.1 hypothetical protein Not tested PiCp 5 Protein 4e-14 54
Cp1002_1456 YP_005681720.1 hypothetical protein Not tested PiCp 5 Protein 2e-13 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LJP_1438c YP_005862710.1 transcriptional regulator DQ212986.1.gene3.p01 Protein 7e-13 45