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Name : LJP_1338 (LJP_1338) Accession : YP_005862610.1 Strain : Lactobacillus johnsonii DPC 6026 Genome accession: NC_017477 Putative virulence/resistance : Virulence Product : ATP-dependent clp protease ATP-binding subunit clpE Function : - COG functional category : - COG ID : - EC number : - Position : 1440323 - 1442491 bp Length : 2169 bp Strand : + Note : - DNA sequence : ATGTTATGCGATAACTGTCACGAACGTCCTGCCTCTATTCATCTTTATACAAATGTAAATGGGCAAGATCGTGAAATCTC ATTATGTCAACAATGTTATCAAGAATTGAAAAATCAACAAGGACAAAATAATAGTATGAATAATAACAATGCATTTTTTG GCGATTTTGATGATTTATTCAACGCCTTAAATAATAACAACAATGAACAAAATAATCCTCAAGGACGTGATCCACGCATG CAAATGGGTGGTGGCCGCAGAGGTGGAAACAATGGTGGTCAAAAATCCCTACTCGACCAGTATGGTACAGATTTAACCGA CTTAGCAAAAAAAGGTAAGATTGATCCAGTTATTGGTCGTGATAAAGAAATTGCTCGCGTTATTGAAATTTTAAACAGAC GGACTAAAAATAATCCTGTTCTTATCGGAGAAGCCGGTGTTGGTAAAACTGCTGTTGTTGAAGGCTTAGCACAACAAATT GTCGACGGTTCAGTTCCAGCTAAGCTTCAAGATAAAAGAATCATTTCTTTAAATATGGTATCAATGGTTCAAGGAACTGG AATTCGCGGTCAATTTGAACAAAGAATGCAACAATTAATCAAAGAATTAGAACAAAACGATAATATCATCCTGTTTATTG ATGAAATTCATGAATTAGTTGGTGCTGGCAACGCTGAAGGTGGTATGGATGCTGGTAACATTATTAAACCAGCCTTAGCT CGTGGAGATTTCCAATTAATTGGTGCTACTACTATTAAGGAATATCGAAACATCGAAAAGGATTCTGCCCTTGCTCGTAG ATTCCAACCAGTGGAGGTTAAAGAGCCTACACCTGAAGAAACAATTAAGATTTTGCAAGGCATTCGTAAGCGTTACGAAG ATTACCACCATGTTCACTATACTGATGAATCTATACAAGCTGCAGTAGATCTTTCTTCACGCTACATTCAAGATCGTTTC TTACCTGATAAAGCTATCGATCTTTTAGACGAAGCTGGTTCAAGGATGAATCTCACTATTCCTTATGTTGATAGTGAAAA AATCAAAGAAAGACTAGATGCTGCTGAAAGCTTAAAGCAAGATGCTTTAAAAAATGAAGATTACGAAAAAGCTGCCTACT ATCGTGATCAGATTGAAAAGTATGAAAAATTAAAAGATCAGAAAGTAGATCCTGATCAAACACCTAAAATCACTGAAAAG ATCATGAATAAGATCGTTGAGGAAAAAACTAATATTCCTGTCGGTGACTTACAAAAACAAGAAGAAACTCAATTAAAGAA TTTAGCTACTGACCTTAAAGATAATGTAATTGGTCAAAACAAAGCCGTTGAAACTGTTGCTCGGGCAATAAGACGAAATC GAGTTGGATTTAACAAATCTGGTCGTCCAATCGGCTCATTCTTATTTGTAGGACCTACTGGTGTAGGTAAAACAGAATTA GCTAAACAATTAGCCAAGCAAATCTTTGGTACAGAAGATGCAATGATTCGATTTGATATGAGCGAATATATGGAACAATA CTCTGTATCTAAGCTAATCGGATCTGCACCAGGTTATGTAGGTTATGAAGAAGCTGGTCAATTAACAGAAAGGGTACGCC ATAATCCATATAGCTTAATTTTATTTGATGAAATTGAAAAAGCTCATCCTGATGTACTCCACCTATTCTTGCAAATTCTC GATGATGGCCGCTTAACTGATTCGCAAGGTCGCACAGTTTCCTTTAAAGATACCATCATCATTATGACTTCTAATGCTGG TCAAGGAATCAAAGAAGCTAGCGTAGGTTTTGCAGCTGAAAACAGTCATCAAGAACAATTTAAGAATAGCTTAGGTCAAT ACTTTAAACCTGAATTCTTAAATAGACTTGATGATATAGTTGAATTTAATGCACTTGATAAGAAAGACTTAATCAAGATT GTTGATTTAATGCTTGCAAACACCAATGATATGGTAAAAGATCAGGGCCTACATATTGATGTTACACCTGAAGCAAAAGA ACTTCTTGTCGAAAAAGGTTATGATCCTTCTATGGGTGCTCGTCCACTTCGTCGTACAATCCAGGAAGAAATTGAAGATA AGGTAGCCGATTATAAACTTGATAATCCAGCTACTAAAGACCTAAAGGCTAATGTAGTTGACGGTAAAATAGTAATTAGT GAAAATTAA Protein sequence : MLCDNCHERPASIHLYTNVNGQDREISLCQQCYQELKNQQGQNNSMNNNNAFFGDFDDLFNALNNNNNEQNNPQGRDPRM QMGGGRRGGNNGGQKSLLDQYGTDLTDLAKKGKIDPVIGRDKEIARVIEILNRRTKNNPVLIGEAGVGKTAVVEGLAQQI VDGSVPAKLQDKRIISLNMVSMVQGTGIRGQFEQRMQQLIKELEQNDNIILFIDEIHELVGAGNAEGGMDAGNIIKPALA RGDFQLIGATTIKEYRNIEKDSALARRFQPVEVKEPTPEETIKILQGIRKRYEDYHHVHYTDESIQAAVDLSSRYIQDRF LPDKAIDLLDEAGSRMNLTIPYVDSEKIKERLDAAESLKQDALKNEDYEKAAYYRDQIEKYEKLKDQKVDPDQTPKITEK IMNKIVEEKTNIPVGDLQKQEETQLKNLATDLKDNVIGQNKAVETVARAIRRNRVGFNKSGRPIGSFLFVGPTGVGKTEL AKQLAKQIFGTEDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTERVRHNPYSLILFDEIEKAHPDVLHLFLQIL DDGRLTDSQGRTVSFKDTIIIMTSNAGQGIKEASVGFAAENSHQEQFKNSLGQYFKPEFLNRLDDIVEFNALDKKDLIKI VDLMLANTNDMVKDQGLHIDVTPEAKELLVEKGYDPSMGARPLRRTIQEEIEDKVADYKLDNPATKDLKANVVDGKIVIS EN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-149 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LJP_1338 | YP_005862610.1 | ATP-dependent clp protease ATP-binding subunit clpE | VFG0080 | Protein | 0.0 | 58 |
| LJP_1338 | YP_005862610.1 | ATP-dependent clp protease ATP-binding subunit clpE | VFG0079 | Protein | 1e-153 | 52 |
