Gene Information

Name : LJP_1084c (LJP_1084c)
Accession : YP_005862357.1
Strain : Lactobacillus johnsonii DPC 6026
Genome accession: NC_017477
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1170259 - 1172028 bp
Length : 1770 bp
Strand : -
Note : -

DNA sequence :
ATGAAGAAAACTAAAATTGTTAGTACTTTAGGGCCAGCCTCAAACGATGTTGAGACTATTACTAAATTAGCTGAAGCAGG
TGCAAACGTATTCCGTTTCAACTTCTCACACGGTGACCACGAAGAACACCGTGCACGTATGAACATGGTTCGTGAGGTTG
AAAAGAAGACTGGTAAACTTCTTGGCATTGCTCTTGATACTAAGGGTGCCGAAATTAGAACTACTGAACAAGAAGGCGGC
AAGTTCACTATTAACACTGGTGACACTATCCGTATTTCTATGGACGACACTAAGAAGGGTAACAAGGACATGATCCACGT
TACCTACGATGGTCTTTACGACGATACTCACGTTGGTGGTCACGTATTAATCGATGATGGTTTAGTTGACCTTTTGATTA
AGGACAAAGATGACGCTAAGAGAGAATTAGTTTGTGAAGCTCAAAACACTGGTGTAATCGGTTCTAAGAAGGGTGTTAAC
GCTCCTGGCGTTGAAATCCGCCTCCCAGGTATTACTGAAAAAGATACTAACGATATTAAGTTCGGTTTGAAGGAAGGTAT
CAACTTCATCTTTGCTTCATTCGTTCGTAAAGCACAAGATGTTCTTGACATTCGTCAATTGCTTGAAGAAGCACATTGTG
AATACGTAAAGATCTTCCCTAAGATTGAATCACAAGAAGGTATTGACAACATCGACGAAATCTTAAAGGTTTCTGATGGT
TTAATGGTTGCTCGTGGTGACATGGGTGTTGAAATTCCATTTATCAATGTTCCATTTGTACAAAAAGAATTGATCAAGAG
ATGTAACGCTTTAGGTAAGCCAGTTATTACTGCTACTCAAATGCTTGACTCAATGCAAGAAAACCCACGTCCTACTCGTG
CCGAAGTTACTGACGTTGCAAACGCTGTTCTTGATGGTACTGACGCAACTATGCTTTCAGGTGAATCTGCAAACGGTCTT
TACCCAGTTAAAGCTGTTAAGGCTATGGCTGAAATCGACATGCGTACTGAAAAGCAACTTGCTAAGCGTAACAAGTTAGC
TCTTCAAAGATTCGAAGAATACAAGGGTTCAAACGTTACTGAAGCTATCGGTGAATCAGTTGTTAGAACTGCTGAAGAAT
TGGGCGTTAAGACTATTATTGCTGCAACTGAATCTGGTTACACTGCACGTATGATCTCTAAGTACCGTCCAAACGCAGAC
ATTATTGCTATGACTTTCAACGACAAGATTCAACACTCATTAGGTGTTGTTTGGGGTGTAAAGCCAATGTTGACTGAAAA
GCCTAAGTCTACTGAAGAAATGTTTGAAAAGGCAGCTGAACTTGCTAAAGAAACTGGTCTTGCAAAAGACGGCGACTTAG
TAATTATCGTTGCTGGTGTTCCTTTGGGCGAAACTGGTACTACTAACTTGATGAAGTTACAATTAATTGGTACCCAACTT
GTTAAAGGTTTAGGTGTTGGTGAACAATCAGTTATTGGTAAAGCTGTAGTTGCAACTTCTGCTGAAGAAGCTAACAGCAA
AGTTCAAGATGGTGACATCTTAGTTGCTAAGACTACTGATAAGGATTACTTACCAGCAATTAAGAAGGCTTCAGGTATGG
TAGTTGAAGCTTCTGGTTTAACTAGCCACGCAGCTGTTGTTGGTCTTTCACTTGGTATCCCAGTTATCGTTGGTGCTACT
GATGCAGTAGAAAAGATCAAGGATGGTTCTAAGATTACTGTTGATGCTCGTCGCGGTGCTGTTTACCAAGGCGAAGCAAC
TAACCTTTAA

Protein sequence :
MKKTKIVSTLGPASNDVETITKLAEAGANVFRFNFSHGDHEEHRARMNMVREVEKKTGKLLGIALDTKGAEIRTTEQEGG
KFTINTGDTIRISMDDTKKGNKDMIHVTYDGLYDDTHVGGHVLIDDGLVDLLIKDKDDAKRELVCEAQNTGVIGSKKGVN
APGVEIRLPGITEKDTNDIKFGLKEGINFIFASFVRKAQDVLDIRQLLEEAHCEYVKIFPKIESQEGIDNIDEILKVSDG
LMVARGDMGVEIPFINVPFVQKELIKRCNALGKPVITATQMLDSMQENPRPTRAEVTDVANAVLDGTDATMLSGESANGL
YPVKAVKAMAEIDMRTEKQLAKRNKLALQRFEEYKGSNVTEAIGESVVRTAEELGVKTIIAATESGYTARMISKYRPNAD
IIAMTFNDKIQHSLGVVWGVKPMLTEKPKSTEEMFEKAAELAKETGLAKDGDLVIIVAGVPLGETGTTNLMKLQLIGTQL
VKGLGVGEQSVIGKAVVATSAEEANSKVQDGDILVAKTTDKDYLPAIKKASGMVVEASGLTSHAAVVGLSLGIPVIVGAT
DAVEKIKDGSKITVDARRGAVYQGEATNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 5e-84 47
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 9e-84 47
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 8e-84 47
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 5e-84 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LJP_1084c YP_005862357.1 pyruvate kinase VFG0479 Protein 2e-84 47