Gene Information

Name : LJP_1011c (LJP_1011c)
Accession : YP_005862287.1
Strain : Lactobacillus johnsonii DPC 6026
Genome accession: NC_017477
Putative virulence/resistance : Virulence
Product : conjugated bile salt hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1092242 - 1093219 bp
Length : 978 bp
Strand : -
Note : -

DNA sequence :
ATGTGTACATCAATTTTATATAGTCCAAAAGATAATTATTTTGGTAGAAATTTAGATTATGAAATTGCCTATGGTCAGAA
AGTGGTAATTACTCCTAGAAATTATCAACTTGATTATCGTCATTTACCAACACAAGATACTCATTATGCAATGATCGGTG
TTTCAGTAGTTGCCAATGACTATCCATTGTATTGTGATGCTATCAATGAAAAAGGATTAGGAATAGCCGGATTAAATTTC
ACTGGTCCTGGTAAATATTTTGCTGTAGATGAAAGCAAAAAGAATGTTACTTCTTTTGAACTGATCCCATATTTACTAAG
CAGTTGTGAAACTATTGAAGATGTAAAGAAATTATTGTCTGAAACTAATATTACTGATGAAAGTTTCTCTAAAGATTTAC
CAGTTACTACTCTTCATTGGTTAATGGGTGATAAAAGTGGTAAGAGTATAGTTATTGAATCAACAGAAACTGGTTTACAC
GTTTATGACAACCCAGTTAATACTTTAACAAATAATCCTGTCTTTCCAGCTCAAGTTGAAACCTTGGCTAACTTTGCTTC
GGTTTCTCCAGCTCAACCTAAAAATACACTTGTACCTAATGCAGATATTAATCTGTATAGTCGTGGATTAGGGACCCATC
ATTTACCAGGCGGAACAGATTCAAATTCTCGCTTTATTAAGGCATCTTTTGTATTAGCTCATTCACCAAAAGGTAATGAT
GAAGTTGAAAATGTAACTAATTTCTTTCATATCTTACATTCAGTTGAACAAGCAAAGGGTACCGATGAAGTTGAAGATAA
TGTATTTGAATTTACCATGTATTCAGACTGTATGAATTTGGATAAGGGAATTTTATACTTTACTACTTACGATAATAACC
AAATTAATGCTGTGGATATGAATAATGAAGATTTGGATACTTCTGACTTGATTACCTATGAATTATTTAAGGATCAAGCC
ATTAAATTTGAAAATTAA

Protein sequence :
MCTSILYSPKDNYFGRNLDYEIAYGQKVVITPRNYQLDYRHLPTQDTHYAMIGVSVVANDYPLYCDAINEKGLGIAGLNF
TGPGKYFAVDESKKNVTSFELIPYLLSSCETIEDVKKLLSETNITDESFSKDLPVTTLHWLMGDKSGKSIVIESTETGLH
VYDNPVNTLTNNPVFPAQVETLANFASVSPAQPKNTLVPNADINLYSRGLGTHHLPGGTDSNSRFIKASFVLAHSPKGND
EVENVTNFFHILHSVEQAKGTDEVEDNVFEFTMYSDCMNLDKGILYFTTYDNNQINAVDMNNEDLDTSDLITYELFKDQA
IKFEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 4e-80 51
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 5e-80 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LJP_1011c YP_005862287.1 conjugated bile salt hydrolase VFG2162 Protein 2e-80 49