Gene Information

Name : LCBD_0008 (LCBD_0008)
Accession : YP_005858050.1
Strain : Lactobacillus casei BD-II
Genome accession: NC_017474
Putative virulence/resistance : Unknown
Product : ssDNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 10682 - 11113 bp
Length : 432 bp
Strand : +
Note : -

DNA sequence : 
ATGTTGAATAGTGTGAGTCTAACAGGGCGGTTGACCAAGGAACCTGAAGTTTTCCGAACGGCTAACGAGCTTGATATCGT
CCGATTTACGTTGGCGGTGAATCGCGTTTTCAAGAATAAAACGGGACAGCGCGAGACTGATTTTATTGAGTGTGTCATTT
TTGGCAAACGCGCCTTAACTTTTGCGGGATCAACTACCAAAGGGTCATTGTTGGGTATTTCAGGGCGGCTGAGTAATAAT
CATTTTGAAAATAAGCAAGGTGAGCAAGTGTGGCGGACCGCTGTCGTCGTTGATAATTTTGCTTGGTTGGAGTCGCGAGC
CACGACGGAAAGCCGCCGGGCAGGGACCTTGCAGGCGACAGGAACAGACGACGTCATGCCAGTAGAGGAAGGCACCCCGC
CACAGGTCGCAACCGACGATCTGCCATTTTAG

Protein sequence : 
MLNSVSLTGRLTKEPEVFRTANELDIVRFTLAVNRVFKNKTGQRETDFIECVIFGKRALTFAGSTTKGSLLGISGRLSNN
HFENKQGEQVWRTAVVVDNFAWLESRATTESRRAGTLQATGTDDVMPVEEGTPPQVATDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 4e-19 49
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 3e-19 49
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 1e-19 49
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 7e-19 48
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-20 45
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-20 44
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-20 44
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-20 43
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-20 43
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 5e-20 42