Gene Information

Name : LCBD_0360 (LCBD_0360)
Accession : YP_005858401.1
Strain : Lactobacillus casei BD-II
Genome accession: NC_017474
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 356161 - 357159 bp
Length : 999 bp
Strand : -
Note : -

DNA sequence :
ATGAGTCCGTACACCCATCTTACCTTAAAAGACCGTGAATCGATACTGCTTGGTATCTCTACAGGCAAAACTCTTGATAC
CATCGCCAAAGAGATAGGTCGTTCCAAGAGTACAGTCAGCCGTGAAATTGCACGTAACGGCGGCTGGCGGAGCTATTCGG
CAGCCACCGCTCAGGACCGCTACCGGCGGGTTCGCTTGGCTAGCAGGCGTCCTCGGATCCTCGATCGACCGGGGACTCGT
GACGCTGTCATTCGATATATCACGGTGCTACATTGGTCGCCTGAGCAGATTGCCGGTCGCTTGTCACTAGAAGGCAGTCC
TATTCGCATCAGCTATTCGACTATCTACAGAGGTATCTACCTAGATAATCTCGGCGTTCCATTGAAGAGCCATGGTGCTC
GCGGGCTACCAAGGCTGCTTCGACACCGAGGCAAGACGCGCAAAATCAAAGGCACCATAAATGAACGCCGGGGGCGCTTC
AATGACGTGCCATCAATTCACGACCGACCCCGGTCGGCAGAAAATCGCAGCTGGTTTGGTCACTGGGAAGGCGATACAGT
ACGCGGTAAAACAGGACACTCTGCATTAGTAACATTAGTTGACCGTAAATCACGCTATCTGCTTTCGAAGCGAACGGCCA
ACGCAAAAGCTGACACTGTTAGAGACGTCATGATTGAGCTGCTTGGTGCCTTACCAGCTAACCGAGTAAGAACAGTGACT
CCTGACCGTGGAAGGGAGTTTGCCCGGTACAGGGAGCTGGCAGAACGCCTGAATACAAAGGTCTTCTTTCCTGACCCACA
CGCGCCTCAACAACGAGGAACTAACGAAAACACCAACGGACTGATTAGAGAATACTTTCCCAAGAACACAGACCTAGACC
TTCAGAGCGACCAGGAAATTGAGACTTACATTGAACAACTGAATAATCGACCACGCAAGGTCTTAGGCTGGAAGACGCCA
TCAGAAGTCTTCATGGGTAAAAAGTTGCACTTGAGTTGA

Protein sequence :
MSPYTHLTLKDRESILLGISTGKTLDTIAKEIGRSKSTVSREIARNGGWRSYSAATAQDRYRRVRLASRRPRILDRPGTR
DAVIRYITVLHWSPEQIAGRLSLEGSPIRISYSTIYRGIYLDNLGVPLKSHGARGLPRLLRHRGKTRKIKGTINERRGRF
NDVPSIHDRPRSAENRSWFGHWEGDTVRGKTGHSALVTLVDRKSRYLLSKRTANAKADTVRDVMIELLGALPANRVRTVT
PDRGREFARYRELAERLNTKVFFPDPHAPQQRGTNENTNGLIREYFPKNTDLDLQSDQEIETYIEQLNNRPRKVLGWKTP
SEVFMGKKLHLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_02710 YP_005176177.1 ISApl1 transposase Not tested ICEPmu1 Protein 1e-63 49
unnamed CAC39292.1 - Not tested LPA Protein 4e-40 43