Gene Information

Name : LCBD_2653 (LCBD_2653)
Accession : YP_005860688.1
Strain : Lactobacillus casei BD-II
Genome accession: NC_017474
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2581932 - 2582642 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence :
ATGGCAATTCTTATTCAGTTGAAACAAGTTAGTAAAGTTTACGGTACTGGCCATACCGCGGTCACAGCTCTGTACCCGAC
CGATTTCACTTTAAAGGCCGGTGAATTTGCGGCCATCATTGGCCCTTCAGGTTCAGGCAAAACAACTTTGCTGACGATTA
TCGGCAACCTGCAACGCCCAAGCAACGGTCAGATTATCGTCAATCATCAAGACACCACCCATTTGAATGAAGGCCAACGA
ACCGATTTACGCTTCAATACGTTTGGTTTTATTTTACAAGCTAGCAATTTGATTCCATTTTTAACCGTGAAAGATCAGCT
CGCTTTAGTTGATCGGTTCAATCATCATCACAAACATGAAACTACCATGTCAGCACTTTTTGACATGCTTGGCATTAGCG
ACTTGGTTACTAATTACCCTGCAGCTTTATCTGGCGGCGAACGGCAACGCGTTGCCATCGCGCGAGCATTGTACAACGAT
CCGTCGATCATCCTCGCCGATGAGCCAACTGCCAGTCTCGACACTAAGCGCGCCTTGCAGGTCGTTCAGTTGTTAGCAGA
TATCGCACACCATTCTCAACGCGGCGTTATGATGATTACCCATGATACACGCTTACTTGATGCTGTCGATACCGTTTATG
AAATGCGCGACGGCCATTTAAAGACGTTAACTGACGAAGGGATGCGGAAAATAAAGGCAAGTGCCATCTAA

Protein sequence :
MAILIQLKQVSKVYGTGHTAVTALYPTDFTLKAGEFAAIIGPSGSGKTTLLTIIGNLQRPSNGQIIVNHQDTTHLNEGQR
TDLRFNTFGFILQASNLIPFLTVKDQLALVDRFNHHHKHETTMSALFDMLGISDLVTNYPAALSGGERQRVAIARALYND
PSIILADEPTASLDTKRALQVVQLLADIAHHSQRGVMMITHDTRLLDAVDTVYEMRDGHLKTLTDEGMRKIKASAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-42 42
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-36 42