Gene Information

Name : LCBD_2607 (LCBD_2607)
Accession : YP_005860643.1
Strain : Lactobacillus casei BD-II
Genome accession: NC_017474
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2543015 - 2543758 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence :
ATGTTAACAGTTAAGGACCTGACCGTTGCCTACGCTGACACACCGGTGTTTGCTGATGTTGCCGTTCATTTTAACGCAGG
TAAGATCACCGGAATCATTGGGCCTAACGGAGCAGGTAAATCGACCTTGATCAAAGCTATTTTGGGATTGATCAAGGTAC
AATCAGGAACGGTCGACTTTTCCGGCCGGACACTCAAAGAGGTACAGCAGTCAATCGCTTATGTCGAGCAACGTAAAGAT
CTTGATCTGACGTTTCCGATCAATGTTCAAGATCTTGTGCTGACTGGGACATATGGCCGATTGGGCTTACTGAAAAGTCC
TGGCAAAAAGGAACGACAGGCGGCGCTTGACGCCCTGACCCAAGTCGGTCTTGAGGATTTTAAGAAACGTCAGATCAGCC
AGTTATCAGGTGGTCAATTGCAACGCGTTTTCGTTGCGCGGGCGATTGTGCAACATGCGGAAATTATCATCATGGACGAA
CCGTTTGTGGGGATCGACATGAAAAGTGAACAAGAGATCATGACGATTTTGAATCAGTGGCGCGATGCCGGTAAAACGCT
GATTGTGGTCCATCATGATCTGAATAAAGTTTCAAAATATTTTGACGAACTTGTGGTCATGAACCACGGCATTGTTGCGG
AAGGACCGGTCAAAGAAGTTTACACCGCCCAAAATATCGAACGGGCATTTTCAGCCGACCTATCGTCCGTCTTGTTTACG
GCAAAGGAGGGTGCGCGCGTATGA

Protein sequence :
MLTVKDLTVAYADTPVFADVAVHFNAGKITGIIGPNGAGKSTLIKAILGLIKVQSGTVDFSGRTLKEVQQSIAYVEQRKD
LDLTFPINVQDLVLTGTYGRLGLLKSPGKKERQAALDALTQVGLEDFKKRQISQLSGGQLQRVFVARAIVQHAEIIIMDE
PFVGIDMKSEQEIMTILNQWRDAGKTLIVVHHDLNKVSKYFDELVVMNHGIVAEGPVKEVYTAQNIERAFSADLSSVLFT
AKEGARV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-47 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-47 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCBD_2607 YP_005860643.1 ABC transporter BAC0400 Protein 1e-53 50