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Name : LCBD_2606 (LCBD_2606) Accession : YP_005860642.1 Strain : Lactobacillus casei BD-II Genome accession: NC_017474 Putative virulence/resistance : Virulence Product : ABC-3 protein Function : - COG functional category : - COG ID : - EC number : - Position : 2542122 - 2543018 bp Length : 897 bp Strand : - Note : - DNA sequence : ATGACATCAATAATGGAATTCTTTACCGCTTTGGGAAAATATGATTTCCTGCAAAGCGCGTTGATCACCGCCATCATGGT TGGTATCATGTCAGGCTTGATCGGAAGCTTCATCATTTTACGCGGCATGTCGCTGATGGGGGATGCGATTTCCCATGCGG TCCTGCCCGGGGTAGCCGTTGCTTATATGCTCGGTATTAACGTCATGATCGGGGCATCGGTTTTCGGAATTATTGCGGCT TTGCTGATCGGGTTTGTGGCAGCCAATAGTAAAATCAAAACCGACACATCTATCGGGGTCGTGTTCAGTGCGTTCTATGC CTTGGGTTTTATTCTGATTTCAATGGCTGAAAGTGCGACCAACTTGCACCATATTCTGTTCGGTAACATTTTAGCCGTCA GCGACAGCGACATTGTCACCACCGCTGTCGTGTTGGGAATTGTGATCCTGTTCGTGGTTCTGTTCTATAAGGAACTGCTG ATCACCTCGTTTGATAATACGTTTGCGAAAAAGTATGGCTTGAATACCACCATGATTCACTATGCTTTGATGCTGGTGTT GACGCTTGTCACCGTTTCAGCCTTGCAGACAGTTGGGATCATTCTAGTTGTGGCGATGCTGATTACGCCAGCAGCAACTG CCTTCTTGTGGACGGATCGGTTAGAAACGATGCTGATCACGTCCGCTAGCGTAGGCGTTTTCTCGGCCATCACCGGACTT TACTTCAGTTTCACCTTTAACTGGGCATCCGGGCCGGCCATTGTGCTCGTAGCTGCGGTCCTGTTCGCCATTTCCTTCGT CTTCTCACCGAAGCAGGCGTTCTTCAGTTTCAGTAAAAAAAACCGAGAAAAGAAAACCGCTGCTGCTACTCACACTGCCG AGGAGGCTGTTCGATGA Protein sequence : MTSIMEFFTALGKYDFLQSALITAIMVGIMSGLIGSFIILRGMSLMGDAISHAVLPGVAVAYMLGINVMIGASVFGIIAA LLIGFVAANSKIKTDTSIGVVFSAFYALGFILISMAESATNLHHILFGNILAVSDSDIVTTAVVLGIVILFVVLFYKELL ITSFDNTFAKKYGLNTTMIHYALMLVLTLVTVSALQTVGIILVVAMLITPAATAFLWTDRLETMLITSASVGVFSAITGL YFSFTFNWASGPAIVLVAAVLFAISFVFSPKQAFFSFSKKNREKKTAAATHTAEEAVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0576 | NP_814341.1 | cation ABC transporter permease | Not tested | Not named | Protein | 7e-57 | 59 |
| ef0094 | AAM75297.1 | EF0094 | Not tested | Not named | Protein | 5e-57 | 59 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 8e-40 | 43 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 6e-40 | 43 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 8e-40 | 43 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 8e-40 | 43 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 8e-40 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LCBD_2606 | YP_005860642.1 | ABC-3 protein | BAC0352 | Protein | 4e-40 | 43 |
| LCBD_2606 | YP_005860642.1 | ABC-3 protein | BAC0442 | Protein | 3e-38 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LCBD_2606 | YP_005860642.1 | ABC-3 protein | VFG0528 | Protein | 3e-40 | 43 |
