Gene Information

Name : LCBD_2470 (LCBD_2470)
Accession : YP_005860506.1
Strain : Lactobacillus casei BD-II
Genome accession: NC_017474
Putative virulence/resistance : Unknown
Product : NusG antitermination factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2422323 - 2422877 bp
Length : 555 bp
Strand : -
Note : -

DNA sequence :
ATGGCTGAAACAGTTACATCGGCAGAAAAACGCTGGTACGTGTTGCATACTTATTCCGGTTACGAGAATAAGGTGAAGAC
CAACCTTGAACAGCGGACTAGCAGTATGAACATGGACGATTATATTTTCCGTGTGGTTGTGCCTGAAGAAGAAGAACATG
AACAAAAGAATGGTAAAGAGAAGATCGAAATGAAAAAGACCTTCCCTGGTTACGTGTTGGTTGAAATGGTGATGACTGAT
CAATCATGGTTCGTTGTTCGTAACACACCGGGTGTGACCGGCTTTGTCGGTTCTCACGGCGCTGGCTCTAAGCCTGCACC
ACTATTGCCTGAAGAAGTTGCCAATGTTTTGCATTCTATGGGTATGAGTACCCGTCACAATGACGTTGAATTCGATGTTG
GCGAACCAGTGACGATTATTGATGGTGCCTTCACCGGTATGCACGGTAAAGTCACGGCAGTTGATAAGGAAAAGATGAAG
TTGAAAGTTGTCACCGAAATGTTCGACCGCGAAGTTACCGCGGAACTGGATTTCGATCAAGTCGACAAGCTGTAG

Protein sequence :
MAETVTSAEKRWYVLHTYSGYENKVKTNLEQRTSSMNMDDYIFRVVVPEEEEHEQKNGKEKIEMKKTFPGYVLVEMVMTD
QSWFVVRNTPGVTGFVGSHGAGSKPAPLLPEEVANVLHSMGMSTRHNDVEFDVGEPVTIIDGAFTGMHGKVTAVDKEKMK
LKVVTEMFDREVTAELDFDQVDKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nusG YP_006310753.1 transcription antitermination protein NusG Not tested FWisland_4 Protein 6e-40 54
nusG YP_281502.1 transcription antitermination protein NusG Not tested Not named Protein 9e-38 53
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 9e-28 41
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 9e-28 41