Gene Information

Name : LCBD_2162 (LCBD_2162)
Accession : YP_005860199.1
Strain : Lactobacillus casei BD-II
Genome accession: NC_017474
Putative virulence/resistance : Resistance
Product : Amino acid ABC transporter ATP-binding protein, PAAT family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2109873 - 2110610 bp
Length : 738 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAATGATCGAATTTCATGACGTTAATAAGTACTTTGGTAAATTTCATGCTTTAAAGAATATCAATCTCACAGTTGA
TCGTGGTGAAGTTGTCACCATCATTGGGCCGTCTGGATCCGGCAAAAGTACCTTACTTCGTTGCATCAATGGGCTGGAGC
GGATCACATCTGGACAACTAATCGTGAATGATTTTGACCTAGCTGACAAGAAAACCGATATGAACCGCATTCGCAAAAAT
GTGGGTATGGTTTTCCAGCATTTTAATCTGTATGCCAATAAGAATGTGTTGCAAAACGTGACCTTAGGACCAGATTTGGT
TCTGAAACGAAATAAGCAAGAAGTTGAGCAGGAAGCGCATGATCTGTTGAAAATGGTTGGCCTCGAAAATAAAGCCGACA
GTTTCCCAGGTGAGCTTTCTGGTGGACAGCAACAGCGGGTAGCTATCGCCCGCAGTTTGGCGATGAAACCTAAAGCTATT
TTGTTTGACGAACCGACCAGTGCACTGGATCCGGAAATGATCGGCGATGTGCTGGATGTGATGCAGAAAATTGCCGAACA
GGGCATGACCATGGTGGTTGTCACTCACGAAATGGGCTTTGCTCGTCACGTCGGTAATCGGATTGTCTTTATGGATGACG
GCCAGATTCTGGTTGACTCGGCCAATGTCGATCAATTCTTTGATGATCCTCAAGAACCACGGGCCAAGGAATTTCTCAGT
AAAATTATTAACCACTAA

Protein sequence : 
MSMIEFHDVNKYFGKFHALKNINLTVDRGEVVTIIGPSGSGKSTLLRCINGLERITSGQLIVNDFDLADKKTDMNRIRKN
VGMVFQHFNLYANKNVLQNVTLGPDLVLKRNKQEVEQEAHDLLKMVGLENKADSFPGELSGGQQQRVAIARSLAMKPKAI
LFDEPTSALDPEMIGDVLDVMQKIAEQGMTMVVVTHEMGFARHVGNRIVFMDDGQILVDSANVDQFFDDPQEPRAKEFLS
KIINH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 2e-45 43
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 5e-45 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCBD_2162 YP_005860199.1 Amino acid ABC transporter ATP-binding protein, PAAT family NC_012469.1.7686878. Protein 7e-26 41