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Name : LCBD_2028 (LCBD_2028) Accession : YP_005860065.1 Strain : Lactobacillus casei BD-II Genome accession: NC_017474 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1983845 - 1985128 bp Length : 1284 bp Strand : - Note : - DNA sequence : ATGTTAGATCTAAAACTGATCCGGCAAAAACCGGAATGGGCCAAGGAAAAGTTAGCTGCACGTGCGATTAAAGGTGAAGA GATTGATGAATTATTAGCTTTGGATACGCGCCGGCGTCAGGTGACCGTTCAAACTGAAGAGCTTAAAGCCAAGCGCAATG ATGTTTCAGGCCAAATTGCGGTTATGAAACGTAACAAGGAAAATGCTGACGATCAAATCAAGGCCATGCGGGAAGTAGGC CAAAAGATTGCGGCTTTAGACAAAGAACTCGCCCAGCTGAATGAAAAAGTAACCTACATTCTCGTCCGATTGCCAAACTT TCCGGCTGATGACGTGCCAATGTCGTTAAATGAAGACGATTCCCGTGAAGAATACAAATGGGGAAACATGCCAACGTTTG ATTTTGAACCAAAGCATCACTGGGATATTGGTGAAAAATTAGGCATTCTGGATTTTGAACGCGCGGCGAAGGTTGCCGGC AGCAGATTTGTTTACTATAAGGGTGCTGGTGCACGTCTTGAACGCGCCGTCTATAACTTCTTCTTGGATGAGCACCAAAA AGAAGGGTATGAAGAAATCATCCCCCCATACCTCGTTAACAATGATTCTATGTTCGGTACTGGTCAATTTCCAAAGTTTA CTGATGCGACCTATACGATCACGAATGATGGTGAACCACTGACTCTGATTCCAACAGCAGAAGTGCCTTTGGTCAACTAT TATCGGAATGACATTGTTGATGCTGAAAAACTTCCAGTTAATTTCACCGCACTTACACCGGCTTTTCGTTCTGAAGCTGG CAGTGCCGGTCGCGATACTCGCGGCTTGATCCGGATGCATCAATTCAATAAGGTCGAAATGGTCAAGTTCTGCAAGCCTG AAGATTCTTGGAAACAACTTCAAAACTTGATTCACGATGCCGAAGATCTTTTGCAAAAGCTCGGATTGCCTTATCATGTC ATCACGCTGGCAAGTAATGACGCTAGCTTCACCAGTGCGAAGACGAATGATCTGGAAGTCTGGATGCCAGCGCAAGATCG CTATCGTGAGATCTCAAGCTGCAGCAATTGCACTGATTTTCAGGCGCGTCGTGCACAAATTCGCTATCGTGATGACGACG GCAAATTGCAGTTTGTCCACACGCTCAATGGCTCAGGGCTTGCTGTAGGGCGAACAGTGGCTTCTATTTTGGAAAATTAT CAGCAAGCTGATGGTTCTGTGAAAATTCCCGATGTGCTTGTACCATACATGCAAGGACAAACTGCAATCACCAAAGAAGA TTAA Protein sequence : MLDLKLIRQKPEWAKEKLAARAIKGEEIDELLALDTRRRQVTVQTEELKAKRNDVSGQIAVMKRNKENADDQIKAMREVG QKIAALDKELAQLNEKVTYILVRLPNFPADDVPMSLNEDDSREEYKWGNMPTFDFEPKHHWDIGEKLGILDFERAAKVAG SRFVYYKGAGARLERAVYNFFLDEHQKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTITNDGEPLTLIPTAEVPLVNY YRNDIVDAEKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFCKPEDSWKQLQNLIHDAEDLLQKLGLPYHV ITLASNDASFTSAKTNDLEVWMPAQDRYREISSCSNCTDFQARRAQIRYRDDDGKLQFVHTLNGSGLAVGRTVASILENY QQADGSVKIPDVLVPYMQGQTAITKED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-129 | 61 |
