Gene Information

Name : rplS (LCBD_1797)
Accession : YP_005859834.1
Strain : Lactobacillus casei BD-II
Genome accession: NC_017474
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1748384 - 1748731 bp
Length : 348 bp
Strand : -
Note : -

DNA sequence :
ATGAACCCATTGATTCAAGAAATTACCAAGAAACAGTTACGCGATGACATTCCAGACTTCCGTCCTGGTGATAACGTCCG
TGTCCATGCCAAGATCGTTGAAGGCGAACGCGAACGTATCCAGCTCTTCGAAGGCGTTGTTATCAAGCGTCACGGCGTTG
GCATTTCCGCTACTTATACAGTACGTAAGATCTCAAATGGCGTTGGTGTGGAACGGACATTCCCGTTACATTCACCACGT
GTTGAAAAGATCGAAGTTACCCGTCACGGCCAAGTGCGTCGGGCAAAGCTCTACTACCTGCGCGCATTACGTGGGAAAGC
AGCTCGTATCCGCGAAAAGCGTCGTTAA

Protein sequence :
MNPLIQEITKKQLRDDIPDFRPGDNVRVHAKIVEGERERIQLFEGVVIKRHGVGISATYTVRKISNGVGVERTFPLHSPR
VEKIEVTRHGQVRRAKLYYLRALRGKAARIREKRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 8e-32 78
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 6e-20 54