Gene Information

Name : gtaB (LCBD_1233)
Accession : YP_005859271.1
Strain : Lactobacillus casei BD-II
Genome accession: NC_017474
Putative virulence/resistance : Virulence
Product : glycerol-3-phosphate dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1203766 - 1204680 bp
Length : 915 bp
Strand : +
Note : -

DNA sequence :
GTGAAAGTTCGTAAGGCAGTCATTCCGGCAGCCGGGCTTGGGACCCGCTTTCTGCCAGCAACTAAAGCTTTAGCCAAAGA
GATGTTACCAATCGTTGATAAACCAACCATTCAGTTCATCGTTGAAGAGGCTAAGGCCAGCGGGATTGAAGACATTCTGA
TCGTTGAGGGTAAACAAAAACGTTCTATTGAGGACCATTTCGATTCTGCTCCTGAATTGGAACAGAATTTGAAAGAAAAA
CATAAAGATGCCTTGTTGGAGTTGGTTCACTCCACTACTGACATCGGCGTTAATCTCTTCTTCGTTCGCCAGCCATATCC
GCGCGGCCTTGGGGATGCCGTTCGTTTGGCGAAGTCATTCGTTGGCGACGAACCATTTGTTGTCATGCTCGGCGATGACC
TGATGCATGACAAGGTACCGTTGACCAAGCAACTGATTAACGAATACGATAAGACCCACGCATCCATTCTTGCTGTTAAA
AAAGTGCCACATGACGAAGTTTCAGCTTATGGCGTTATTGACCCTGAAAAAGAAGTTTCAAAGGGACTCTTCAACGTCAA
GAAATTTGTTGAAAAGCCAGCTGTTGCCGATGCACCAAGTGACTTGGCCATCATTGGTCGTTACTTGTTGACACCAGAGA
TCTTTGATATTCTCGAAAATCAAAAACCTGGTAAGGGTAACGAAATTCAACTCACCGATGCCATCGACACCTTGAACCAA
ACCCAGCGTGTCTTCGCCCATGAATTCACCGGAGATCGTTATGACGTTGGGAATAAGTTTGGCTATGTGAAGACCAACAT
CGAGTATGGCTTGACCCATCCAGAAGTGAAGGATGAGCTGCGTGCTTATATTCTTGACTTGGCTTCAAAGCTACAGGCAA
ATAAGCCTGTGGGGAAGCCGGCAAATAAGAAGTAA

Protein sequence :
MKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEAKASGIEDILIVEGKQKRSIEDHFDSAPELEQNLKEK
HKDALLELVHSTTDIGVNLFFVRQPYPRGLGDAVRLAKSFVGDEPFVVMLGDDLMHDKVPLTKQLINEYDKTHASILAVK
KVPHDEVSAYGVIDPEKEVSKGLFNVKKFVEKPAVADAPSDLAIIGRYLLTPEIFDILENQKPGKGNEIQLTDAIDTLNQ
TQRVFAHEFTGDRYDVGNKFGYVKTNIEYGLTHPEVKDELRAYILDLASKLQANKPVGKPANKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 5e-80 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gtaB YP_005859271.1 glycerol-3-phosphate dehydrogenase VFG0964 Protein 3e-101 71