|
Name : LCBD_1127 (LCBD_1127) Accession : YP_005859166.1 Strain : Lactobacillus casei BD-II Genome accession: NC_017474 Putative virulence/resistance : Unknown Product : Glucan 1,6-alpha-glucosidase Function : - COG functional category : - COG ID : - EC number : - Position : 1093699 - 1095324 bp Length : 1626 bp Strand : + Note : - DNA sequence : ATGACACAGTGGTGGCAACGCGCCGTGATCTATCAGGTCTATCCGCAGAGTTTTCAGGATAGCAATGGTGACGGTATTGG CGATCTTAAAGGTCTGATTCAGCGTTTAGACTACCTGCAAAAACTCGGCATTGACGCCATCTGGTTGAGTCCAGTGTATC AGTCGCCTGGTCAAGACAATGGTTATGACATCTCAGATTATCAAGCCATTAATCCACAATTTGGCACCATGGCTGATTTG GAGGCGTTGATTCGCCAAGCAAAAGCACGCGATATTCGCATCATCATGGACTTGGTGGTGAATCATACATCGGACGAACA TCGGTGGTTTAAAGTGTCGCGCCAGTCGCGCGCTAATCCATATCGTGACTATTACATATGGCGCGATGGTTCGGCCATAG GTGGCCCGCCTAACGCCATGAAATCAACATTTTCCGGTTCGGCATGGCAGCGTGATGAAGCCACCGGTCAATATTATTTA CATCTTTTTGGTGATAAGCAGCCAGACTTAAACTGGGCTAATCCTCAAGTTAGACAAGCCATCTACAAGATGATGAATTT CTGGATCAGCAAGGGTATCGGCGGCTTTCGAATGGATGTTATTGACTTGATTGGCAAGGAGCCGGATCGCGGCATTCGAG AAAATGGTCCTAAGCTGCATCCATACCTTCAAGAAATGAATCGCGCGACATTTGGCGATACGGATTTGCTGACAGTTGGC GAGACCTGGGGTGCAACCCCCAGCATCGCCCAACAATATGCAGATCCCAAAAGACACGAGTTATCGATGGTTTTCCAGTT TGAAATGATGCAACTTGATCAGCAAAATGATGACAAGTGGGCATTGAGACCACTTGACCCAGCGGCTTTAAAACAGGTTT TAATCAAGTGGCAGACGGCATTTGATTATACAAAAGGGTGGAACAGTCTTTTCTGGAATAATCATGATTTGCCGCGAATT GTGTCACGCTGGGGTAACGATCAACGTTATCGGGTTAAAAGCGCCAAAATGTTTGCCATTTTACTGCATCTATTGCGCGG TACGCCATATGTGTACCAAGGTGAAGAAATCGGCATGACCAACGCACCCGTGGCAAGCATAGTTGATGTTCAAGATATTG AAAGCGTTAACATGTATCGTGAACAGATGGCACTGGGGCAATCAGAAAAAACGATTTTAACCGCCATTAATGCAAAAGGT CGGGATAATGCCCGCACGCCGATGCAGTGGCGTGATGCCCCCAACGCTGGCTTCACAACAAGTCAGCCATGGCTGCGGGT CAATCCAAACTACCACACCATCAATGTGGCGGCGGCCTTAGACGATCCCGATTCGATTTTTTATACTTACCAGCAGCTAA TTCGATTACGCCACGAAAATGATGTGATCGTCAATGGCCGGTTTGAAGCCATTGAAAATCTTGCCCCGGCGGTCATGGCA TACTATCGCGTTCTTGGTCATACTCGTTGGCTTGTTGTGGTCAACTTATCGGAAAAGCGGCAACCATTAGATCTTAACGA TCAGCTAGAAAAAACCATCGTGACAAATGATGCACCATTGCAATCATTAACAGACCAAACTTTACAACCATATCAGGCAT TCGCCGCGATTGTGCGGCATGTGTAA Protein sequence : MTQWWQRAVIYQVYPQSFQDSNGDGIGDLKGLIQRLDYLQKLGIDAIWLSPVYQSPGQDNGYDISDYQAINPQFGTMADL EALIRQAKARDIRIIMDLVVNHTSDEHRWFKVSRQSRANPYRDYYIWRDGSAIGGPPNAMKSTFSGSAWQRDEATGQYYL HLFGDKQPDLNWANPQVRQAIYKMMNFWISKGIGGFRMDVIDLIGKEPDRGIRENGPKLHPYLQEMNRATFGDTDLLTVG ETWGATPSIAQQYADPKRHELSMVFQFEMMQLDQQNDDKWALRPLDPAALKQVLIKWQTAFDYTKGWNSLFWNNHDLPRI VSRWGNDQRYRVKSAKMFAILLHLLRGTPYVYQGEEIGMTNAPVASIVDVQDIESVNMYREQMALGQSEKTILTAINAKG RDNARTPMQWRDAPNAGFTTSQPWLRVNPNYHTINVAAALDDPDSIFYTYQQLIRLRHENDVIVNGRFEAIENLAPAVMA YYRVLGHTRWLVVVNLSEKRQPLDLNDQLEKTIVTNDAPLQSLTDQTLQPYQAFAAIVRHV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-126 | 49 |
