Gene Information

Name : LCBD_1092 (LCBD_1092)
Accession : YP_005859131.1
Strain : Lactobacillus casei BD-II
Genome accession: NC_017474
Putative virulence/resistance : Unknown
Product : ClpP protease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1054100 - 1054807 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGACGACAGTGGTACCGATTAAAGGTGACATCGTTACTAATGATTACGGATGGCTTTACGATCTATTTGGCGATGACTA
TGCTTCACCTAAAAGCGTCTCTGATCTAATTAACAAGGCTAATGGTGACGACTTATCCGTTGAGATCAATTCAGGTGGAG
GAATTGTCGATGCCGGCTCTGAAATTTACACCATGCTTCGTGCTTATAAAGGGCCGGTCAATGTGAACGTTGTGGGTGTG
GCATATTCCGCTGCATCTTTGATCGCGATGGCGGGTGATGTCGTAGCCATGTCACCTGCAGGGATGATGATGATCCACAA
TGTCTCCAGTGGACAGATGGGTGACTATCATGACATGCAGAATGCTGCGGACTCGTTAAAGAAGTCAAACATAGCAATAG
CTAATGCCTATATGGCCAAGACGGGTCTATCTCAAGCAGAAATCCTTGACTTGATGGATTCAACTTACTGGCTGGATCCG
CAGACAGCCATTGAAAAAGGGTTTGCTGACAAGATGATGTTTGACAATGCGGAGAAGCCAGGGAAAATGATCATGACTGC
TAGCCTGAATAAGATTCCAAGTCTTGCCACGCTGAACCAAATGAAACACTTCCGAAACACAACAGCACTAAAAAAAGCGC
CGTCTGATGATGATCAGATGGCGCTTTTGAATGCAGAATACAATCTCTTAAATTTGAAAGGGGAATAA

Protein sequence : 
MTTVVPIKGDIVTNDYGWLYDLFGDDYASPKSVSDLINKANGDDLSVEINSGGGIVDAGSEIYTMLRAYKGPVNVNVVGV
AYSAASLIAMAGDVVAMSPAGMMMIHNVSSGQMGDYHDMQNAADSLKKSNIAIANAYMAKTGLSQAEILDLMDSTYWLDP
QTAIEKGFADKMMFDNAEKPGKMIMTASLNKIPSLATLNQMKHFRNTTALKKAPSDDDQMALLNAEYNLLNLKGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1964 NP_372488.1 phiN315 scaffolding protein-like protein Not tested ¥ÕSa3 Protein 2e-27 42
SA1775 NP_375073.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-27 42
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 2e-27 42
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 2e-27 42
SAOV_1103 YP_005736598.1 Prophage Clp protease-like protein Not tested ¥ÕSa2 Protein 2e-27 42
SAKOR_01943 YP_008492131.1 ATP-dependent endopeptidase clp proteolytic subunit clpP Not tested ¥ÕSa3 Protein 2e-27 42