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Name : LC2W_0478 (LC2W_0478) Accession : YP_005855397.1 Strain : Lactobacillus casei LC2W Genome accession: NC_017473 Putative virulence/resistance : Unknown Product : Oligo-1,6-glucosidase, putative Function : - COG functional category : - COG ID : - EC number : - Position : 472657 - 474342 bp Length : 1686 bp Strand : + Note : - DNA sequence : ATGAATGAAATACCATGGTGGAAAAAGAGCGTTGTCTATCAGGTTTATCCGAAAAGCTTCAATGATAGTAACGGTGATGG CATTGGAGACTTAAATGGTATCACTGAAAAATTGGATTATTTAGCCGATTTGGGCGTAGATGTGCTCTGGCTGAATCCGA TTTACCGATCACCACAGGTTGATAACGGCTACGATATTTCGAATTATCGCGATGTTGAACCACAATTAGGGACAATGGCC GATTTTGAACACTTGTTGCAGGCAGCACATGATCGACATCTAAAGATTATCTTGGACTTGGTTGTGAATCACACGTCTGA TCAACATCCGTGGTTCAAAGCCGCCAAATCATCAGTGAGCGATCCGCATCACGATTACTACATCTGGAAGAAGCCAGTTG ACGATCATGAGCCTAATAATTGGGGCTCAAGCTTTGGTGGTTCAGCTTGGGAATACAAAAAAGATCTGGGCGAGTATTAC CTGCATCTTTTTGCCAAGCAACAACCGGATCTCAACTGGGAAAATCCTAAGGTACGCCAAGAAGTTTATGATCTCATGCG CTTTTGGCTAGATAAGGGAGTTGATGGCTTCCGGATGGATGTCATATCACTAATTTCTAAAGATCCGGCTTATCCAGATG GCCCGCTTATCCAAGGCAAGGCATACGGTAGTTATTATGCCGGAGCGGCAAATGGCCCAAAGGTTCATGATTACCTGCAG GAAATGCACGAGCAAGTGTTGTCGCACTACAATATCATGACGGTTGGCGAGACGCCCCATACAACGGCACAGCAGGCACA ATTATACACGGCTGCAGATCGTCACGAGTTGGATATGGTTTTTCATTTTGACCATATGCATCTTGACTATGGCCAATATG GCAAGTTCTCGACAAATCGATTTAAATTAGTTGATCTCAAAGAAGTCTTGGCACGTTGGGAGAACACATTAGCGCAAGTC GATGGCTGGAACAGCCTCTACTGGAGCAACCACGATCAGCCACGGCCTGTGACACGATTTGGAGATGAAGGTCAGTATCG AATTCGATCAGCCAAAATGCTGGGGACTGTGCTGCACATGTTGCAGGGAACGCCTTATATTTTTGAGGGAGAAGAACTCG GTCTGAAGAATGTTCATTTTGATCAATTAAGCGATTATAACGATCTTGAGACTAAGAACATTTTTAAAGAACTCACGCAA CAACATCATGAAAGTCCTGAAGCGGCCATGAAGGCCATTTATCTGCATTCGCGCGATAATGCTCGCACGCCGATGCCTTG GGACGGCAGTGAAAAAGGTGGCTTTACCACCGGGCAACCATGGCTGGGGCTGAATCCAGATCACAAGCAGATTAATGCGG CTAAGGATCTGGCAGATAGTGACGGTGTTTACCACTATTATCAACACCTGATTAAATTACGACATGAAGAGCCATTGATT ACCACTGGTGTATTTGAGCTACTTGCTCCTGATGATCCGAACTTGTTTATTTACCTGCGCAAAGGGGAACATGAGACCTT GCTGGTGGCAGGTAACTTCTCAAGTGAGGAACGCACATGGTCAGTGCCGGATGACTTGCAAGCTAAGGATGTGGATGTGT TGATTCGGAATAGTGAAATTTCCGATTCACTAGAGAAAACACTGACATTACCACCATTTGGCGCAGTGGTGTACAAGCTT CAATAG Protein sequence : MNEIPWWKKSVVYQVYPKSFNDSNGDGIGDLNGITEKLDYLADLGVDVLWLNPIYRSPQVDNGYDISNYRDVEPQLGTMA DFEHLLQAAHDRHLKIILDLVVNHTSDQHPWFKAAKSSVSDPHHDYYIWKKPVDDHEPNNWGSSFGGSAWEYKKDLGEYY LHLFAKQQPDLNWENPKVRQEVYDLMRFWLDKGVDGFRMDVISLISKDPAYPDGPLIQGKAYGSYYAGAANGPKVHDYLQ EMHEQVLSHYNIMTVGETPHTTAQQAQLYTAADRHELDMVFHFDHMHLDYGQYGKFSTNRFKLVDLKEVLARWENTLAQV DGWNSLYWSNHDQPRPVTRFGDEGQYRIRSAKMLGTVLHMLQGTPYIFEGEELGLKNVHFDQLSDYNDLETKNIFKELTQ QHHESPEAAMKAIYLHSRDNARTPMPWDGSEKGGFTTGQPWLGLNPDHKQINAAKDLADSDGVYHYYQHLIKLRHEEPLI TTGVFELLAPDDPNLFIYLRKGEHETLLVAGNFSSEERTWSVPDDLQAKDVDVLIRNSEISDSLEKTLTLPPFGAVVYKL Q |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 7e-136 | 49 |
