Gene Information

Name : LC2W_2786 (LC2W_2786)
Accession : YP_005857699.1
Strain : Lactobacillus casei LC2W
Genome accession: NC_017473
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2710218 - 2711177 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence :
ATGGCATTGATCAGTCTGGAACACGTCACAAAGGAATATGACGGCAAGCCCGTGGTCAACGATCTTAGCCTGAAGGTCGA
TCAAGGGGAGTTGTTTGTGCTAGTCGGCACCTCCGGCAGCGGCAAAACCACGACGCTGAAAATGATCAATCGTTTGGTTG
ATCCAACGAGCGGCGTCATCGAATTTGCCGACAAACCGCTCACCAGTTACAAAATGCGCGACTTGCGGTGGGATCTGGGG
TATGTCCTGCAGCAGATCGCCTTGTTTCCAACCATGACAGTGGCGCAAAACATTGCCGTGATCCCCGAAATGAAGGGCTG
GTCGCGCCAAAAAATTCGGACGGCAACAGACGAGTTACTCACAACAGTTGATTTGCCGCCAGCCGAGTACCGCAATCGCA
TGCCAAGCGAATTATCCGGCGGGCAGCAGCAACGCATCGGTATTTTGCGGGCCTTAGCATCACGGCCTAAGGTGGTCTTG
ATGGACGAACCGTTCTCAGCATTAGATCCGATTTCCCGCACTCAGCTTCAGGATATGCTGCTGCATTTGCATCGTGCCTT
GAAGACCACTGTCATTTTTGTGACCCACGATATGGCTGAAGCGATGAAACTTGGTGATCGGATCGGCGTGATGCGCGGTG
GCAAACTCTTGCAGGTTGATACGCCGGAAGAAATTGCGACCAATCCGGCTAACGATTTCGTGGCGGATTTGTTCAAGGGA
GCGCAAGCCAATCAGGGTCTGCAGGTCACGCTCAGTCAGTTAGCACCATTTGCAGCGGATGTGTCGGCCCGGCATGCGGT
TGGCGGCAACTTGACGCTGGCCGAGGCGTTGCCGCTTTTAGATGCGCATGAGGCGTTGCGCGTGAATAGTGAACATGGTG
CGTTTGTTGTCAATACCCATAGTGTTGTCGCTTATCTCGCAAGTGCATTTGTCGATCAGAACACAGAGACGAAGGAGTGA

Protein sequence :
MALISLEHVTKEYDGKPVVNDLSLKVDQGELFVLVGTSGSGKTTTLKMINRLVDPTSGVIEFADKPLTSYKMRDLRWDLG
YVLQQIALFPTMTVAQNIAVIPEMKGWSRQKIRTATDELLTTVDLPPAEYRNRMPSELSGGQQQRIGILRALASRPKVVL
MDEPFSALDPISRTQLQDMLLHLHRALKTTVIFVTHDMAEAMKLGDRIGVMRGGKLLQVDTPEEIATNPANDFVADLFKG
AQANQGLQVTLSQLAPFAADVSARHAVGGNLTLAEALPLLDAHEALRVNSEHGAFVVNTHSVVAYLASAFVDQNTETKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-38 47
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-38 47