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Name : LC2W_2675 (LC2W_2675) Accession : YP_005857589.1 Strain : Lactobacillus casei LC2W Genome accession: NC_017473 Putative virulence/resistance : Virulence Product : ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones Function : - COG functional category : - COG ID : - EC number : - Position : 2595555 - 2598062 bp Length : 2508 bp Strand : - Note : - DNA sequence : ATGGACAACTTATTTACCCCTAGTGCTAAAAATGTATTGCTTTTAGCCCAGGAACAAGCGAAGTACTTCCATCATCATGC TGTTGGGACAGAACATTTGCTCATGGCACTGGTCATGGAAAAAGATGGTATCGCTGGTAAGACGCTGCGTCAGTTAGGGG TCACTGAAAATGATGTCCATGACGAGATCGAGCGCTTCACAGGGTATGGGACTGTTGATGCCGCTGGTCAAGCTAGTGAT AGTTATTTGCCTTACTCACCAAAAGGTAAAGAGATTTTGGCGTTTGCAGGTGACGAAGCAAAACGGTTAGGTGCTTTAAA GATCGGTACCGAGCACGTTTTGCTTGGCTTGCTACGTGAAGATGACATCTTGGCAGCACGGATTTTGCAAAACCTTGGTC TCAGTCTTTCGAAGACGCGTCAAATGGTTTTCAAGAAGATGGGGATTGCGGACACTGCAGCAAAGCGTCGCCCAATGGCA CGTGGCGGTGCTCGTCAAGATGGACAAGGTACGCCAACGCTAGATGGTTTGGCGCGGGATTTGACTCAAATGGCGCGCGA GAATCGGATGGATCCGGTTGTTGGGCGTGACAAAGAAGTACGCCGGCTGATCCAGATTCTGGCACGGCGGACAAAGAACA ACCCTGTACTGATTGGCGAACCTGGTGTTGGTAAAACTGCAATTGCAGAAGGCTTTGCTGAGAAAATTGTGTCTGGTAAA GTGCCGGATGACATGGTCAACAAGCGTTTGATGATGCTTGACATGGGTTCACTTGTCGCTGGCACCAAGTATCGTGGTGA GTTTGAAGATCGGCTGAAGAAGATCATTGATGAAATTTATAAAGATGGCAATGTCATTTTGTTCATTGATGAATTGCATA CTTTGATCGGTGCTGGCGGCGCAGAAGGCGCTATTGATGCTTCCAATATTTTGAAACCGGCATTAGCTCGTGGTGAATTA CAATTGATCGGTGCCACGACCTTAGATGAATATCAAAAGTATATTGAAAAAGATGCTGCTTTGGAGCGGCGGTTTGCGAC GATTCAAGTCGACGAACCAACTGAAGAAGAAGCTGAACAAATTTTGAAGGGCTTGCGTCCTCGTTATGAGGCGCATCACG GTGTCACGATTACTGACGAAGCGCTGCATCAGGCGGTGGTTTTGTCATCACGGTACATCACGACACGGTTTTTGCCTGAC AAGGCAATTGATCTAGTTGACGAAAGTGCGGCGAAGGTTCGCTTGGACAAGGCCAATGTTGAGACGAAGGCCGACAAGCT TCAGGATGAACTGGCCAAGCTGGTAGCTGATAAAGAAGACGCTATTGACCATCAAGATTTCGAAACGGCTGCGAACATCC GGACTCAGGAAGCTGATTTAAAAACGAAGTTGGCCGACACGCCTGAACCAGTTAATGAAAGTGGCGTTCGAACTGACATT AAAGTGACGGGCGACGATGTGGCAGAAGTGGTTTCTCAATGGACCGGTGTGCCAGTCACCCAGTTGCAGAAAAAAGAATC CGATCGGTTGGTTAACTTGGAGAAGATCCTGCATGAGCGGGTTGTTGGCCAAGACGAAGCAGTTTCCGCTGTTGCGCGTG CTATCCGGCGTGCTCGTTCTGGTTTGAAAGATCCGACGCGGCCAATTGGTTCCTTCATGTTCCTCGGGCCGACAGGTGTT GGGAAAACGGAGCTGGCTAAGGCGTTAGCCGAGGCAATGTTTGGTTCTGAGGATGCCATGATCCGGGTTGATATGTCTGA GTACATGGAGAAATTTAGTACCAGTCGGTTGATCGGCGCGGCCCCTGGTTACGTTGGTTACGACGAAGGCGGTCAACTAA CCGAAAAAGTCCGCAACAAGCCTTACTCGGTTGTGTTGTTGGACGAAGTTGAAAAGGCGCATCCAGATGTCTTTAACATT TTGCTGCAGGTGCTGGATGATGGCTATTTAACCGATTCGAAGGGTCGGCGGGTTGATTTCCGTAACACGATTTTGATCAT GACTAGTAACATCGGCGCAACCGCTATCCGTGACGATAAGACTGTTGGCTTTGGTGCCAAGGATCCACAAGCTGACTTTA ATGCCATGAAGAGCCGGATGCTGGACGAACTTAAAAAAGCGTTCCGACCAGAATTCCTTAACCGAATTGATGAAACCGTG GTCTTCCACAGTCTCAACAAGGCTGAGCTGCATGAAATCGTTAAGATCATGACGAAGACAGTGCTTAGTCGCATTAAGGA TCAAGGGATTGACGTTAAAATTACCCCAGCCGGTATTGACGCTGTCGCCGCTGCCGGCTTCGATCCAGAGTACGGTGCAC GTCCAATTCGGCGGGCACTGCAAACCGGTGTCGAAGATCAGTTAAGTGAACTCTTATTGACAGGCCAAGCTAAAACCGGT GACTTGATCCAAATCGGTGCTAAAAAAGGCAAGCTGACATTTACTATTAAAGAGAACAAAGGCAAGCAAAAAGAAAACGG TGCTTCAAAAGAACCCGTTAAAGCCTAG Protein sequence : MDNLFTPSAKNVLLLAQEQAKYFHHHAVGTEHLLMALVMEKDGIAGKTLRQLGVTENDVHDEIERFTGYGTVDAAGQASD SYLPYSPKGKEILAFAGDEAKRLGALKIGTEHVLLGLLREDDILAARILQNLGLSLSKTRQMVFKKMGIADTAAKRRPMA RGGARQDGQGTPTLDGLARDLTQMARENRMDPVVGRDKEVRRLIQILARRTKNNPVLIGEPGVGKTAIAEGFAEKIVSGK VPDDMVNKRLMMLDMGSLVAGTKYRGEFEDRLKKIIDEIYKDGNVILFIDELHTLIGAGGAEGAIDASNILKPALARGEL QLIGATTLDEYQKYIEKDAALERRFATIQVDEPTEEEAEQILKGLRPRYEAHHGVTITDEALHQAVVLSSRYITTRFLPD KAIDLVDESAAKVRLDKANVETKADKLQDELAKLVADKEDAIDHQDFETAANIRTQEADLKTKLADTPEPVNESGVRTDI KVTGDDVAEVVSQWTGVPVTQLQKKESDRLVNLEKILHERVVGQDEAVSAVARAIRRARSGLKDPTRPIGSFMFLGPTGV GKTELAKALAEAMFGSEDAMIRVDMSEYMEKFSTSRLIGAAPGYVGYDEGGQLTEKVRNKPYSVVLLDEVEKAHPDVFNI LLQVLDDGYLTDSKGRRVDFRNTILIMTSNIGATAIRDDKTVGFGAKDPQADFNAMKSRMLDELKKAFRPEFLNRIDETV VFHSLNKAELHEIVKIMTKTVLSRIKDQGIDVKITPAGIDAVAAAGFDPEYGARPIRRALQTGVEDQLSELLLTGQAKTG DLIQIGAKKGKLTFTIKENKGKQKENGASKEPVKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LC2W_2675 | YP_005857589.1 | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | VFG0079 | Protein | 0.0 | 61 |
| LC2W_2675 | YP_005857589.1 | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones | VFG0080 | Protein | 2e-146 | 48 |
