Gene Information

Name : LC2W_2615 (LC2W_2615)
Accession : YP_005857530.1
Strain : Lactobacillus casei LC2W
Genome accession: NC_017473
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2540835 - 2541536 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence :
ATGACTAATCCAATTATTAGTTTACGTCAGATTAAAAAAACCTATAACGATAAAACTGTCTTGCATGACATTCATCTTAA
TTTGTACCCAGGTGAATTCTTGGCACTGGTCGGCATGAGTGGCGGCGGCAAAAGCACCATTCTTCGCCTAATCGCAGGAC
TCGAGCCGCCGACTGCCGGTGACATCCAACGTCAAAATGGACTGTTCATGCGGATGATGTTTCAAAATGATCGCTTGCTG
CCGTGGTTAACCAATTTGGACAACGTTTCTTTTCGATCACACGATCCCGCTATCGTGCAACAAGCTAAGTCACTGTTAAC
AGCAGTTGGCCTTGCTGACAAAAGCGATGGTTATCCCGTACAACTTTCAGGTGGTCAAAAGCAGCGGCTGGCGTTGGCGC
GAGCGTTGTTAGCTAAGCCGCAGTTACTGTTGCTCGATGAACCACTTGGCGCATTAGATGCCTTGACGCGGCAACATATG
CAGGATCTGATCCTTGATATTTTCACAAAACAGCATTTAAGCAGTTTGCTCATCACGCATGATGTTAATGAAGCTGCTCG
CATGGCCGATCGCATTGTGGTTGTTAAAGATGGCAAGCTGGCATACGAAACAAGCGGTGCTCGTGGTCAATCACCAGAGA
AAATTGCGAACACAGCGGCGCGAGTTTTGAACGCGATTGTGTCTGAGCCGGTGACAACATGA

Protein sequence :
MTNPIISLRQIKKTYNDKTVLHDIHLNLYPGEFLALVGMSGGGKSTILRLIAGLEPPTAGDIQRQNGLFMRMMFQNDRLL
PWLTNLDNVSFRSHDPAIVQQAKSLLTAVGLADKSDGYPVQLSGGQKQRLALARALLAKPQLLLLDEPLGALDALTRQHM
QDLILDIFTKQHLSSLLITHDVNEAARMADRIVVVKDGKLAYETSGARGQSPEKIANTAARVLNAIVSEPVTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-15 44