Gene Information

Name : LC2W_2585 (LC2W_2585)
Accession : YP_005857500.1
Strain : Lactobacillus casei LC2W
Genome accession: NC_017473
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2512130 - 2512885 bp
Length : 756 bp
Strand : -
Note : -

DNA sequence :
TTGGAGGCTCTTATGTTAACAGTTAAGGACCTGACCGTTGCCTACGCTGACACACCGGTGTTTGCTGATGTTGCCGTTCA
TTTTAACGCAGGTAAGATCACCGGAATCATTGGGCCTAACGGAGCAGGTAAATCGACCTTGATCAAAGCTATTTTGGGAT
TGATCAAGGTACAATCAGGAACGGTCGACTTTTCCGGCCGGACACTCAAAGAGGTACAGCAGTCAATCGCTTATGTCGAG
CAACGTAAAGATCTTGATCTGACGTTTCCGATCAATGTTCAAGATCTTGTGCTGACTGGGACATATGGCCGATTGGGCTT
ACTGAAAAGTCCTGGCAAAAAGGAACGACAGGCGGCGCTTGACGCCCTGACCCAAGTCGGTCTTGAGGATTTTAAGAAAC
GTCAGATCAGCCAGTTATCAGGTGGTCAATTGCAACGCGTTTTCGTTGCGCGGGCGATTGTGCAACATGCGGAAATTATC
ATCATGGACGAACCGTTTGTGGGGATCGACATGAAAAGTGAACAAGAGATCATGACGATTTTGAATCAGTGGCGCGATGC
CGGTAAAACGCTGATTGTGGTCCATCATGATCTGAATAAAGTTTCAAAATATTTTGACGAACTTGTGGTCATGAACCACG
GCATTGTTGCGGAAGGACCGGTCAAAGAAGTTTACACCGCCCAAAATATCGAACGGGCATTTTCAGCCGACCTATCGTCC
GTCTTGTTTACGGCAAAGGAGGGTGCGCGCGTATGA

Protein sequence :
MEALMLTVKDLTVAYADTPVFADVAVHFNAGKITGIIGPNGAGKSTLIKAILGLIKVQSGTVDFSGRTLKEVQQSIAYVE
QRKDLDLTFPINVQDLVLTGTYGRLGLLKSPGKKERQAALDALTQVGLEDFKKRQISQLSGGQLQRVFVARAIVQHAEII
IMDEPFVGIDMKSEQEIMTILNQWRDAGKTLIVVHHDLNKVSKYFDELVVMNHGIVAEGPVKEVYTAQNIERAFSADLSS
VLFTAKEGARV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-47 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-47 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LC2W_2585 YP_005857500.1 ABC transporter BAC0400 Protein 1e-53 50