Gene Information

Name : LC2W_1640 (LC2W_1640)
Accession : YP_005856557.1
Strain : Lactobacillus casei LC2W
Genome accession: NC_017473
Putative virulence/resistance : Unknown
Product : Ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1591656 - 1593827 bp
Length : 2172 bp
Strand : +
Note : -

DNA sequence :
ATGTCATTAAAAACAATTAGTCCGGATCAAGTCACCTATTACGCGCTCAACAACGAGATCAACATTCCTGTGAATGACCA
GATTCCGTTGAACAAAGACAAGGAAGCGTTGCAGGCATTTTTGACCGAAAATGTAGCGCCAAATACGATGCAATTTGATT
CGCTGGCTGATCGACTGAAGTATTTAGTCGATAACCACTATTATGAAGCCGACTTTTTGAACAAGTATCAGCCAGCTTTT
TTGGAAAAACTGGATCAATTTCTTTCAGCGCAGCATTTTCAGTTCAAATCCTTCATGGCCGCCTACAAATACTATGCACA
GTATGCCTTGAAAACCGATGACGGTACCCAGTATTTAGAAGATTTTAAAGATCGGGTTTTTGCCAACGCACTTTTCTTTG
CAGACGGTAACGAGGACTTGGCAGTTGACCTTGCTGATGAAATGATTCATCAACGTTATCAACCGGCCACCCCTTCCTTC
TTGAATGCTGGCCGGGCCCGCCGTGGCGAACTGGTTTCATGTTTTTTGTTGCAAATCACTGATGACATGAATTCAATTGG
CCGGGCGATCAATTCGGCCTTGGAATTGTCCCGAATTGGTGGCGGCGTTGGCCTCACCTTGTCCAACCTACGTGAAGCCG
GTGCCCCGATTAAGGGCATTGAAGGTGCCGCTAGCGGCGTCTTGCCAGTCATGAAGCTGTTGGAAGACTCTTTTTCCTAT
AGCAACCAATTGGGCCAGCGACAAGGTGCCGGTGTTGTGTATCTGAACGTTTTCCATCCTGACATCATCAGTTTCTTAGG
TGCCAAGAAGGAAAACGCGGACGAAAAGTACCGGGTTAAAACACTCAGTCTTGGCGTTGTCGTTCCGGATAAGTATTATG
ACCTCATTAAGGCTAATGCCGATATGTACCTCTTCTCCCCTTACTCGGTTGAACGGGTTTACGGGAAGCCGTTCTCTTAT
GTTGATATCACCAAGGAATATGACAACATGGTTGCCAATCCGGCCATTAAGAAGTACAAGATTAAGGCCCGTGATCTAGA
AAACGAAATCTCCAAACTTCAGCAGGAATCTGGTTATCCTTATATTATCAACATTGATACGGCAAATCGCGCCAACCCAA
TCGAAGGCAAAATCATCATGAGTAATCTGTGCTCGGAAATCATGCAGGTTCAGGTGCCTTCCAAGTTGAACAATAAACAG
GAATATGAAGTGCTGGGTACTGATGTATCTTGCAACTTAGGTAGCACGAATATTCCCAACCTGATGCATAGCCGCGACTT
TGGCCGCAGTGTCGAAGCAATGGTTCGTGCTTTGACTTATGTCACGGACCACAGCAACATCGACGTTGTACCTTCCGTCC
AGCACGGTAATCACCAGGCTCACAGCATTGGCCTTGGTGCGATGGGCTTGCACACTTATTTTGCGAAGAATCATATGTTC
TACGGTTCGCCTGAAAGCTTGGACTTCACCAATATTTACTTCCTTTTGCTGAATTACTACACCTTGAGGGCATCCAATAA
AATTGCCCAAGAACGCGGCGAAAGCTTCCACAACTTCGAAAACAGCAAGTATGCGGACGGTAGCTACTTCGATAAGTACA
CCGAACAAGTATGGGCACCGAAGTATGACAAGGTTCGCGCGCTGTTTGATGGCATTCACATTCCGACGCAGGCTGATTGG
GAAGCGCTGAAGACCAGTGTCATGAAAGATGGTCTCTACCATCAGAACCGCATGGCTGTTGCGCCAAATGGGTCGATCAG
TTACATCAACGACACCAGTGCATCATTACAGCCGATCGTTAACCGCATTGAAGATCGGCAAGAAAAGAAGATCGGCACGA
TTTACTACCCTGCTCCAGACCTTTCTAATGACACGATGCCTTACTATCAAAGTGCCTATGATATTGATATGCGTAAAGTG
ATTGACGTTTACGCTGCTGCCCAGCAGCATGTCGATCAAGGAATGGCCATGACGTTGTTCATGCGCAGTACCATTCCGGC
TGGCCTTTATCCTTGGAAAGATGGCCGAACCGATAAAATGACCACCCGTGATTTAAATATTTTGCGTAATTACGCACATC
ATAAGGGCATCAAGTCGATTTACTACATCCGGACTTACACGGATGATCAAGAAGAAATCGGCAGCAACGCTTGTGAAAGC
TGCTCAATCTGA

Protein sequence :
MSLKTISPDQVTYYALNNEINIPVNDQIPLNKDKEALQAFLTENVAPNTMQFDSLADRLKYLVDNHYYEADFLNKYQPAF
LEKLDQFLSAQHFQFKSFMAAYKYYAQYALKTDDGTQYLEDFKDRVFANALFFADGNEDLAVDLADEMIHQRYQPATPSF
LNAGRARRGELVSCFLLQITDDMNSIGRAINSALELSRIGGGVGLTLSNLREAGAPIKGIEGAASGVLPVMKLLEDSFSY
SNQLGQRQGAGVVYLNVFHPDIISFLGAKKENADEKYRVKTLSLGVVVPDKYYDLIKANADMYLFSPYSVERVYGKPFSY
VDITKEYDNMVANPAIKKYKIKARDLENEISKLQQESGYPYIINIDTANRANPIEGKIIMSNLCSEIMQVQVPSKLNNKQ
EYEVLGTDVSCNLGSTNIPNLMHSRDFGRSVEAMVRALTYVTDHSNIDVVPSVQHGNHQAHSIGLGAMGLHTYFAKNHMF
YGSPESLDFTNIYFLLLNYYTLRASNKIAQERGESFHNFENSKYADGSYFDKYTEQVWAPKYDKVRALFDGIHIPTQADW
EALKTSVMKDGLYHQNRMAVAPNGSISYINDTSASLQPIVNRIEDRQEKKIGTIYYPAPDLSNDTMPYYQSAYDIDMRKV
IDVYAAAQQHVDQGMAMTLFMRSTIPAGLYPWKDGRTDKMTTRDLNILRNYAHHKGIKSIYYIRTYTDDQEEIGSNACES
CSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 53