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Name : LC2W_1402 (LC2W_1402) Accession : YP_005856320.1 Strain : Lactobacillus casei LC2W Genome accession: NC_017473 Putative virulence/resistance : Unknown Product : S1 RNA binding domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 1344349 - 1346526 bp Length : 2178 bp Strand : + Note : - DNA sequence : TTGATTGAAGAACAAACTGTTCAATTAGTCCAACAAAGTTTAACCGGCATCACCGATCGACAGATCAATACCGTTTTGAA TTTGATGCAAGAAGGCAACACGGTACCGTTTATCGCGCGTTATCGTAAAGAAATGACAGGCAGCCTTGATGAAGTACAGA TTCAGGCAATTGAGGAAGCTTATAAACGTGCGACTGCTTTGCAAGATCGTAAAGCGGCCGTCATTAAAAGCATCGCCGAG CAAGGAGCACTGACTGCCAAGCTGGAACAGCAGATTCAAGCCAGTACCAAACTGCAAGATGTGGAAGATATCTATCTACC ATACAAGCAGAAGCGCCAGACCAAGGCGATGGTGGCTAAGTCGCGCGGCCTTGAACCATTCGCCAAATGGTTGCTTGCTT TTCCAAACGGATCTCTTGAGCAGGAAGCCCAGAAGTACGTTGATCCAGCCAAAGAAATTGCCACCGTCCAGGATGTTTTA GATGGTGCCCACGAAATTTTGGCGGAGACTTTTAGCGAAATGGCTCCGATTCGTAACTGGGTGCGCAATTTTACCATGCG CACAGGAACCATTAGCGCGACAGTCAAAACGAAGGGCAAAGAACTAGACGAAAAAGGCGTTTATCAGCAATACTACGACT TCGAGGAAACCGTCAAGAAGATGTCCTCAACGCGTACGTTGGCGATCAATCGTGGGGAAAAAGAGAAAATTCTGACGGTT AAAGTCAAAGTCGACACTGATGCTGTCCTGCATTACTTCCATTTTAAAATTATCGACAATCGGCCCAGTACGGAAGCAAC GGCGTTTATTGAGGACGCTTACGAAGATGCATACAAGCGATTTGTTGGGCCAGCGATTGAGCGGGAAGTACGGAATGCGT TAACAACTGATGCCGAAGAGAAATCCATCAAGGTTTTCGGCCAAAATCTGTACAACTTGCTGATGCAAGCACCAATCAAA GGCAAGGTTGTGTTAGGTTTTGACCCGGCATACCGCACTGGCTGTAAATTGGCTGTCGTTGATGAAAATGGTAAGTTCTT GGCCAAGGCTGTGATTTATCCGCATAAACCAGCACCAGAAAAAAAGCGTCAGGAAGCCGCACCAGAACTCATTGCGCTGC TTGAAAAATATCAAGTGACGATGATCGCGATCGGTAATGGCACGGCGAGTCGGGAATCCGAGCAATTTGTCGCTGAAACA TTGAAGCAGATCAAACGTGATGTTTTTTACGTGATCGTGAATGAAGCAGGGGCGTCTGTTTACTCTGCGAGCCAAGAAGC GCGTGATGAATTTCCCGACTTGCATGTGGAACAACGCAGCGCTATCAGCATTGCGCGCCGCCTACAAGATCCGCTCGCCG AACTCGTCAAAATTGATCCAGAGTCGGTCGGAGTTGGTCAGTATCAACACGACTTGCCAAGCAAAGATCTGTCCAATGAA GTCGATGTCGTGGTCGAACGCGCTGTGAACCAGGTCGGCGTGAACTTGAACACAGCCAGTTACCAACTGTTGACGCACAT TTCCGGCCTATCCAAGACCATCGCAACTAATATCGTGCACTACCGCGATGAAAACGGCCGCTACAACAGCCGTGCAGAGT TGAAAAAGGTGCCACGTTTAGGACCGAAAGCATTTGAGCAATCAGTCGGATTCCTACGCATTATCGGCGGCAAAAATCCG TTAGACAACACCGACATCCATCCTGAAAGTTATCCAGTCGCTAAAAAAGTTCTGGCGGCAGCAGGTGTGACCGCCGCTGA TTCAGGCAATGCAGCAGCAGTTGCTAAAATCCGCGAGGTACCCATTGCGCCATTGGTAAGTGAAGGGGTTGGTGCAGAAA CCGCGAAAGATATCATCACCAGCCTGCAAAATCCGGGCCGAGACCTGCGCGACAACATGGCCGCACCTATTCTGCGACAA GATGTCTTGACAATGGAAGATCTGAAAGTGGGGATGAAGCTAGAAGGCACCGTCCGCAATGTCGTCGACTTCGGCGCATT CGTTGACATCGGTGTGAAACATGACGGTCTCGTCCATGTCTCCAAGATGGCGCGCAAATTTGTGCGTGATCCAAAAACCG TGGTTGCCATTGGTGACATTGTTGAGGTTTGGATTGAGTCGGTGGATCTGGCGAGGGAGCGGATTCAGTTGACGATGGTG GATCCGGCGGCTGATTAA Protein sequence : MIEEQTVQLVQQSLTGITDRQINTVLNLMQEGNTVPFIARYRKEMTGSLDEVQIQAIEEAYKRATALQDRKAAVIKSIAE QGALTAKLEQQIQASTKLQDVEDIYLPYKQKRQTKAMVAKSRGLEPFAKWLLAFPNGSLEQEAQKYVDPAKEIATVQDVL DGAHEILAETFSEMAPIRNWVRNFTMRTGTISATVKTKGKELDEKGVYQQYYDFEETVKKMSSTRTLAINRGEKEKILTV KVKVDTDAVLHYFHFKIIDNRPSTEATAFIEDAYEDAYKRFVGPAIEREVRNALTTDAEEKSIKVFGQNLYNLLMQAPIK GKVVLGFDPAYRTGCKLAVVDENGKFLAKAVIYPHKPAPEKKRQEAAPELIALLEKYQVTMIAIGNGTASRESEQFVAET LKQIKRDVFYVIVNEAGASVYSASQEARDEFPDLHVEQRSAISIARRLQDPLAELVKIDPESVGVGQYQHDLPSKDLSNE VDVVVERAVNQVGVNLNTASYQLLTHISGLSKTIATNIVHYRDENGRYNSRAELKKVPRLGPKAFEQSVGFLRIIGGKNP LDNTDIHPESYPVAKKVLAAAGVTAADSGNAAAVAKIREVPIAPLVSEGVGAETAKDIITSLQNPGRDLRDNMAAPILRQ DVLTMEDLKVGMKLEGTVRNVVDFGAFVDIGVKHDGLVHVSKMARKFVRDPKTVVAIGDIVEVWIESVDLARERIQLTMV DPAAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 7e-133 | 44 |
